Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC016542.3-201ENST00000623520 619 ntBASIC6.3□□□□□ -1.4
SNX18Q96RF0 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.3□□□□□ -1.4
SNX18Q96RF0 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.3□□□□□ -1.4
SNX18Q96RF0 AC006453.5-201ENST00000636451 619 ntBASIC6.3□□□□□ -1.4
SNX18Q96RF0 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.3□□□□□ -1.4
SNX18Q96RF0 AL354702.2-202ENST00000641481 890 ntBASIC6.3□□□□□ -1.4
SNX18Q96RF0 AL139254.2-202ENST00000641937 1156 ntBASIC6.3□□□□□ -1.4
SNX18Q96RF0 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNX18Q96RF0 OR4G1P-202ENST00000641173 1788 ntBASIC6.3□□□□□ -1.4
SNX18Q96RF0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNX18Q96RF0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.3□□□□□ -1.4
SNX18Q96RF0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNX18Q96RF0 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SNX18Q96RF0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNX18Q96RF0 IMMTP1-201ENST00000435590 2219 ntBASIC6.3□□□□□ -1.4
SNX18Q96RF0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNX18Q96RF0 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.3□□□□□ -1.4
SNX18Q96RF0 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.3□□□□□ -1.4
SNX18Q96RF0 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 TPTE2P2-201ENST00000403471 1466 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 RNA5SP472-201ENST00000363868 119 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 RNU6-670P-201ENST00000364312 104 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 SNORA70H-201ENST00000383910 135 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 SNORA70J-201ENST00000384182 135 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 NPM1P31-201ENST00000399021 764 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 MTATP6P31-201ENST00000406985 692 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 RN7SKP199-201ENST00000410325 305 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AL161742.1-201ENST00000418154 584 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AL606490.8-201ENST00000441624 319 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 MORF4L1P4-201ENST00000450245 976 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 PABPC1P10-201ENST00000464731 381 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 CHCHD2P7-201ENST00000508008 452 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC010460.2-201ENST00000509054 677 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC073111.2-201ENST00000605657 1075 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC063962.1-201ENST00000608199 521 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC018645.2-201ENST00000609151 472 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC096586.2-201ENST00000610260 441 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 GAPDHP41-201ENST00000613707 975 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AL031658.2-201ENST00000616850 651 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC131009.3-201ENST00000621809 287 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC090772.4-201ENST00000623599 362 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 AC127071.1-201ENST00000624997 712 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 OR7E161P-202ENST00000641994 1033 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 MAPK10-287ENST00000641217 3037 ntBASIC6.29□□□□□ -1.4
SNX18Q96RF0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.29□□□□□ -1.4
SNX18Q96RF0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNX18Q96RF0 MFSD8-256ENST00000641949 1640 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SNX18Q96RF0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNX18Q96RF0 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SNX18Q96RF0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AC010329.1-201ENST00000593903 8328 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms