Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AC018690.1-201ENST00000608144 626 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL139254.3-201ENST00000641097 674 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL163152.1-201ENST00000642001 374 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL589993.1-201ENST00000407450 2524 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL139384.2-201ENST00000613809 3590 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL512353.3-201ENST00000417517 1326 ntBASIC7.52□□□□□ -1.2
CDK5RAP3Q96JB5 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.52□□□□□ -1.2
CDK5RAP3Q96JB5 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.52□□□□□ -1.2
CDK5RAP3Q96JB5 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC009220.2-201ENST00000489759 1751 ntBASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC007012.2-201ENST00000623206 1676 ntBASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC007485.2-201ENST00000623493 1667 ntBASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AL359694.1-201ENST00000403247 604 ntBASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 BMS1P11-201ENST00000442351 885 ntBASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 BMS1P9-201ENST00000457640 885 ntBASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AL109628.1-201ENST00000556877 366 ntBASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC135626.1-201ENST00000556983 435 ntBASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC100832.2-201ENST00000582080 776 ntBASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC127071.2-201ENST00000623293 527 ntBASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP3Q96JB5 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AL022323.4-201ENST00000623980 13120 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 SNORA38B-201ENST00000363524 131 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 RNA5SP355-201ENST00000365317 135 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 SNORA40.4-201ENST00000390971 128 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AHCYP8-201ENST00000425108 209 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AK3P5-201ENST00000432033 519 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 PMS2P9-201ENST00000441237 515 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 SULT1D1P-201ENST00000458020 882 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AL079303.1-201ENST00000486611 463 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AC063943.2-201ENST00000495697 534 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AL445383.1-201ENST00000554689 874 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 DPPA3P2-202ENST00000557188 1219 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 ANP32BP1-202ENST00000568553 737 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AC107993.1-201ENST00000591343 684 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AC004241.2-201ENST00000614562 444 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AL356094.1-201ENST00000624663 1212 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 AC007114.2-201ENST00000576014 4281 ntBASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.51□□□□□ -1.21
CDK5RAP3Q96JB5 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms