Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AL691447.1-201ENST00000419456 387 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC117434.1-201ENST00000419971 836 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 REREP1Y-201ENST00000422655 198 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 RBMY2JP-201ENST00000425544 1059 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 REREP2Y-201ENST00000439103 200 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 MGAT2P1-201ENST00000449718 797 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 RPSAP48-201ENST00000466509 889 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 MARK2P8-201ENST00000476069 952 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 OR52K3P-201ENST00000531655 943 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC024614.1-201ENST00000577546 307 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC016839.1-201ENST00000578162 867 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC092032.1-201ENST00000603090 165 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC004908.1-201ENST00000606572 541 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 AL161931.1-201ENST00000612768 246 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC005393.1-201ENST00000617916 584 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AP002512.4-202ENST00000641599 4530 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RFT1Q96AA3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
RFT1Q96AA3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
RFT1Q96AA3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
RFT1Q96AA3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.84□□□□□ -1.48
RFT1Q96AA3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RFT1Q96AA3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFT1Q96AA3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFT1Q96AA3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 CAP1P2-201ENST00000417455 1409 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFT1Q96AA3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFT1Q96AA3 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC100810.3-201ENST00000633189 2240 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFT1Q96AA3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFT1Q96AA3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFT1Q96AA3 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFT1Q96AA3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFT1Q96AA3 PPIAP26-201ENST00000377951 522 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 RNA5SP53-201ENST00000391299 120 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 DPPA2P2-201ENST00000418220 897 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC097721.1-201ENST00000427150 1253 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 AL645936.2-201ENST00000430565 928 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 ANXA2P2-201ENST00000435128 1020 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 MED28P7-201ENST00000456611 530 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 BX323845.2-201ENST00000458382 234 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC092824.1-201ENST00000483524 576 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 RN7SL143P-201ENST00000496780 297 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC112184.1-201ENST00000505179 312 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.83□□□□□ -1.48
RFT1Q96AA3 RN7SKP5-201ENST00000517045 272 ntBASIC5.83□□□□□ -1.48
RFT1Q96AA3 IGHV1-14-201ENST00000523391 241 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms