Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC013268.3-201ENST00000262716 2324 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AC079753.1-201ENST00000623243 3868 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 MAPK10-287ENST00000641217 3037 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 RNA5SP429-201ENST00000363688 109 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AC024937.2-201ENST00000411669 1242 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AC007568.1-201ENST00000422912 471 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 SCDP1-201ENST00000455244 1081 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 RPSAP24-201ENST00000461543 873 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AP005902.2-201ENST00000518393 307 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AP001994.1-201ENST00000527539 826 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 HNRNPCP8-201ENST00000528764 888 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 RPS27AP19-201ENST00000597285 458 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AC005277.2-201ENST00000617898 390 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AC103564.3-201ENST00000621194 220 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AC062022.1-201ENST00000451026 1684 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 RN7SKP118-201ENST00000364331 330 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 UBBP1-201ENST00000392399 473 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AL136100.1-201ENST00000407696 330 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 MICG-208ENST00000416822 132 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AL355355.1-201ENST00000442900 793 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 MGAT2P1-201ENST00000449718 797 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AL929410.2-201ENST00000451170 189 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 RPL26P30-201ENST00000453533 435 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AC022415.1-202ENST00000486612 523 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AC091932.1-201ENST00000569381 427 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AL353807.4-201ENST00000604995 257 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AC009283.1-201ENST00000615852 645 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 TCL6_3.1-201ENST00000619064 137 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 MRPL57P1-201ENST00000621486 265 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AC018692.2-201ENST00000624130 348 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 AL121936.2-201ENST00000641935 662 ntBASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC50Q8IVM0 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC50Q8IVM0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC50Q8IVM0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CCDC50Q8IVM0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC50Q8IVM0 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC50Q8IVM0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms