Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC4.4□□□□□ -1.7
SCXQ7RTU7 DLEU2L-201ENST00000371086 3555 ntBASIC4.4□□□□□ -1.7
SCXQ7RTU7 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCXQ7RTU7 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 FUNDC2P3-201ENST00000334716 533 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AL596268.1-201ENST00000427910 1048 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 NPM1P23-201ENST00000440193 849 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AL445991.1-201ENST00000450381 475 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC099670.1-201ENST00000455141 783 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 PGBD4P1-201ENST00000473644 407 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC068522.1-201ENST00000482895 345 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 RN7SL37P-201ENST00000490461 307 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 RN7SL143P-201ENST00000496780 297 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 OR7E154P-201ENST00000525174 932 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC007537.1-201ENST00000539347 327 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 MIR5095-201ENST00000578844 88 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 DIMT1P1-201ENST00000603970 763 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC009779.8-202ENST00000607990 932 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AP005212.3-201ENST00000619964 528 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC127071.2-201ENST00000623293 527 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 CASC19-232ENST00000641480 1244 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SCXQ7RTU7 AC092701.1-201ENST00000623627 1551 ntBASIC4.4□□□□□ -1.71
SCXQ7RTU7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCXQ7RTU7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SCXQ7RTU7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.39□□□□□ -1.71
SCXQ7RTU7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SCXQ7RTU7 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC4.39□□□□□ -1.71
SCXQ7RTU7 AC005005.4-201ENST00000623789 16698 ntBASIC4.39□□□□□ -1.71
SCXQ7RTU7 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SCXQ7RTU7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC4.39□□□□□ -1.71
SCXQ7RTU7 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 AC007159.1-201ENST00000566529 4706 ntBASIC4.39□□□□□ -1.71
SCXQ7RTU7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.39□□□□□ -1.71
SCXQ7RTU7 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
SCXQ7RTU7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SCXQ7RTU7 RNA5SP172-201ENST00000365061 118 ntBASIC4.39□□□□□ -1.71
SCXQ7RTU7 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 AL451142.1-201ENST00000375867 775 ntBASIC4.39□□□□□ -1.71
SCXQ7RTU7 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCXQ7RTU7 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC4.39□□□□□ -1.71
SCXQ7RTU7 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms