Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TPM4P67936 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
TPM4P67936 RNA5SP176-201ENST00000390956 110 ntBASIC7.2□□□□□ -1.26
TPM4P67936 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
TPM4P67936 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
TPM4P67936 CYP4F30P-202ENST00000420048 405 ntBASIC7.2□□□□□ -1.26
TPM4P67936 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM4P67936 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM4P67936 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM4P67936 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM4P67936 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.2□□□□□ -1.26
TPM4P67936 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC7.2□□□□□ -1.26
TPM4P67936 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.2□□□□□ -1.26
TPM4P67936 AC022206.1-201ENST00000495947 347 ntBASIC7.2□□□□□ -1.26
TPM4P67936 AC106800.3-201ENST00000511389 308 ntBASIC7.2□□□□□ -1.26
TPM4P67936 OR4C1P-201ENST00000530880 937 ntBASIC7.2□□□□□ -1.26
TPM4P67936 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM4P67936 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
TPM4P67936 AL132640.2-202ENST00000559732 614 ntBASIC7.2□□□□□ -1.26
TPM4P67936 FRG2IP-201ENST00000563581 781 ntBASIC7.2□□□□□ -1.26
TPM4P67936 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.2□□□□□ -1.26
TPM4P67936 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.2□□□□□ -1.26
TPM4P67936 MRPL57P3-201ENST00000619218 176 ntBASIC7.2□□□□□ -1.26
TPM4P67936 AC006328.2-201ENST00000623198 397 ntBASIC7.2□□□□□ -1.26
TPM4P67936 AC012005.2-201ENST00000624333 397 ntBASIC7.2□□□□□ -1.26
TPM4P67936 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM4P67936 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TPM4P67936 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
TPM4P67936 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TPM4P67936 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TPM4P67936 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TPM4P67936 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TPM4P67936 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC7.2□□□□□ -1.26
TPM4P67936 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
TPM4P67936 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.2□□□□□ -1.26
TPM4P67936 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.2□□□□□ -1.26
TPM4P67936 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TPM4P67936 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.19□□□□□ -1.26
TPM4P67936 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 AL137141.1-201ENST00000624622 4836 ntBASIC7.19□□□□□ -1.26
TPM4P67936 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TPM4P67936 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
TPM4P67936 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
TPM4P67936 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
TPM4P67936 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 AP000432.2-201ENST00000624164 2048 ntBASIC7.19□□□□□ -1.26
TPM4P67936 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
TPM4P67936 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TPM4P67936 RNA5SP301-201ENST00000362537 121 ntBASIC7.19□□□□□ -1.26
TPM4P67936 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM4P67936 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM4P67936 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.19□□□□□ -1.26
TPM4P67936 AC027124.1-201ENST00000440852 466 ntBASIC7.19□□□□□ -1.26
TPM4P67936 GAPDHP20-201ENST00000444107 1007 ntBASIC7.19□□□□□ -1.26
TPM4P67936 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM4P67936 RPL7L1P3-201ENST00000455249 689 ntBASIC7.19□□□□□ -1.26
TPM4P67936 AC079193.1-201ENST00000460497 588 ntBASIC7.19□□□□□ -1.26
TPM4P67936 RN7SL223P-201ENST00000470401 294 ntBASIC7.19□□□□□ -1.26
TPM4P67936 AC018475.1-201ENST00000478358 465 ntBASIC7.19□□□□□ -1.26
TPM4P67936 AC131392.1-201ENST00000506490 633 ntBASIC7.19□□□□□ -1.26
TPM4P67936 IGKV2D-38-201ENST00000518423 240 ntBASIC7.19□□□□□ -1.26
TPM4P67936 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM4P67936 AP001646.2-201ENST00000528645 1156 ntBASIC7.19□□□□□ -1.26
TPM4P67936 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM4P67936 RN7SL208P-201ENST00000577964 296 ntBASIC7.19□□□□□ -1.26
TPM4P67936 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.19□□□□□ -1.26
TPM4P67936 AC093635.1-201ENST00000609028 555 ntBASIC7.19□□□□□ -1.26
TPM4P67936 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.19□□□□□ -1.26
TPM4P67936 AL445649.1-201ENST00000615941 691 ntBASIC7.19□□□□□ -1.26
TPM4P67936 OR5G5P-204ENST00000627642 621 ntBASIC7.19□□□□□ -1.26
TPM4P67936 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM4P67936 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM4P67936 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.19□□□□□ -1.26
TPM4P67936 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM4P67936 AC078880.4-201ENST00000617627 1749 ntBASIC7.18□□□□□ -1.26
TPM4P67936 MSL3P1-202ENST00000440028 1468 ntBASIC7.18□□□□□ -1.26
TPM4P67936 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TPM4P67936 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.18□□□□□ -1.26
TPM4P67936 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TPM4P67936 BIN2P1-201ENST00000504996 1530 ntBASIC7.18□□□□□ -1.26
TPM4P67936 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM4P67936 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TPM4P67936 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TPM4P67936 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM4P67936 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.18□□□□□ -1.26
TPM4P67936 RPL23AP17-201ENST00000401064 499 ntBASIC7.18□□□□□ -1.26
TPM4P67936 AL136100.1-201ENST00000407696 330 ntBASIC7.18□□□□□ -1.26
TPM4P67936 U3.43-201ENST00000410734 213 ntBASIC7.18□□□□□ -1.26
TPM4P67936 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM4P67936 RPL23AP85-201ENST00000421838 433 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms