Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
HMGCS2P54868 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
HMGCS2P54868 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.46□□□□□ -1.22
HMGCS2P54868 RNA5SP110-201ENST00000362638 115 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 AL157884.1-201ENST00000424561 454 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 AC003989.1-201ENST00000434569 565 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.46□□□□□ -1.22
HMGCS2P54868 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.46□□□□□ -1.22
HMGCS2P54868 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 OR7A15P-201ENST00000449848 1009 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 PPIAP27-201ENST00000453800 265 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.46□□□□□ -1.22
HMGCS2P54868 RN7SL643P-201ENST00000471845 291 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 RPL7P51-201ENST00000490532 749 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.46□□□□□ -1.22
HMGCS2P54868 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 AC092375.1-201ENST00000550410 637 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.46□□□□□ -1.22
HMGCS2P54868 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 AC007346.1-201ENST00000569208 867 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 MIR3614-201ENST00000581261 86 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 AC008521.2-201ENST00000591021 259 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 SNORA74.4-201ENST00000607595 199 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 FAM27E2-201ENST00000619668 403 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMGCS2P54868 CASC19-228ENST00000641414 1684 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMGCS2P54868 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HMGCS2P54868 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HMGCS2P54868 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 AC007406.5-201ENST00000570140 3170 ntBASIC7.46□□□□□ -1.22
HMGCS2P54868 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGCS2P54868 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.46□□□□□ -1.22
HMGCS2P54868 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMGCS2P54868 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.46□□□□□ -1.22
HMGCS2P54868 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.45□□□□□ -1.22
HMGCS2P54868 LPAL2-203ENST00000454031 2498 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.45□□□□□ -1.22
HMGCS2P54868 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
HMGCS2P54868 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.45□□□□□ -1.22
HMGCS2P54868 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.45□□□□□ -1.22
HMGCS2P54868 SNORD16-201ENST00000362803 99 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.45□□□□□ -1.22
HMGCS2P54868 MIR130B-202ENST00000385018 82 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.45□□□□□ -1.22
HMGCS2P54868 SOCS5P1-201ENST00000440415 949 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 HLA-DPA3-207ENST00000454398 229 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.45□□□□□ -1.22
HMGCS2P54868 AC023194.2-201ENST00000465398 406 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 AC117395.1-201ENST00000487390 403 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 AC025458.1-201ENST00000506046 166 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 OR4D12P-201ENST00000509361 911 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 AC011411.1-201ENST00000509592 876 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.45□□□□□ -1.22
HMGCS2P54868 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.45□□□□□ -1.22
HMGCS2P54868 LINC00556-201ENST00000569603 412 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 AC012146.2-201ENST00000576545 416 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.45□□□□□ -1.22
HMGCS2P54868 AC004801.6-201ENST00000616571 978 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 AC116631.1-202ENST00000640984 683 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.45□□□□□ -1.22
HMGCS2P54868 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.45□□□□□ -1.22
HMGCS2P54868 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.45□□□□□ -1.22
HMGCS2P54868 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.45□□□□□ -1.22
HMGCS2P54868 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
HMGCS2P54868 AC123769.2-201ENST00000624332 5984 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.45□□□□□ -1.22
HMGCS2P54868 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGCS2P54868 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.45□□□□□ -1.22
HMGCS2P54868 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HMGCS2P54868 AC007485.2-201ENST00000623493 1667 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HMGCS2P54868 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HMGCS2P54868 AC074141.1-201ENST00000588129 2995 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 AC125238.2-201ENST00000430003 1440 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.44□□□□□ -1.22
HMGCS2P54868 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGCS2P54868 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGCS2P54868 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
HMGCS2P54868 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms