Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 OR51P1P-201ENST00000447547 942 ntBASIC7.06□□□□□ -1.28
NEK3P51956 MTND5P8-201ENST00000449817 1083 ntBASIC7.06□□□□□ -1.28
NEK3P51956 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.06□□□□□ -1.28
NEK3P51956 RN7SL492P-201ENST00000460700 295 ntBASIC7.06□□□□□ -1.28
NEK3P51956 RPL34P34-201ENST00000465389 354 ntBASIC7.06□□□□□ -1.28
NEK3P51956 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC7.06□□□□□ -1.28
NEK3P51956 RFPL4AP3-201ENST00000515267 345 ntBASIC7.06□□□□□ -1.28
NEK3P51956 IGLC4-201ENST00000517690 248 ntBASIC7.06□□□□□ -1.28
NEK3P51956 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.06□□□□□ -1.28
NEK3P51956 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.06□□□□□ -1.28
NEK3P51956 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
NEK3P51956 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.06□□□□□ -1.28
NEK3P51956 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.06□□□□□ -1.28
NEK3P51956 RN7SL32P-201ENST00000580514 281 ntBASIC7.06□□□□□ -1.28
NEK3P51956 PRELID3BP3-201ENST00000584963 545 ntBASIC7.06□□□□□ -1.28
NEK3P51956 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.06□□□□□ -1.28
NEK3P51956 AC025262.3-201ENST00000623666 360 ntBASIC7.06□□□□□ -1.28
NEK3P51956 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.06□□□□□ -1.28
NEK3P51956 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NEK3P51956 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.06□□□□□ -1.28
NEK3P51956 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 AC079949.2-201ENST00000617117 2933 ntBASIC7.06□□□□□ -1.28
NEK3P51956 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.06□□□□□ -1.28
NEK3P51956 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NEK3P51956 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.05□□□□□ -1.28
NEK3P51956 AC009220.2-201ENST00000489759 1751 ntBASIC7.05□□□□□ -1.28
NEK3P51956 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
NEK3P51956 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
NEK3P51956 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.05□□□□□ -1.28
NEK3P51956 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.05□□□□□ -1.28
NEK3P51956 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.05□□□□□ -1.28
NEK3P51956 FAR1P1-201ENST00000427163 934 ntBASIC7.05□□□□□ -1.28
NEK3P51956 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.05□□□□□ -1.28
NEK3P51956 MTCO3P43-201ENST00000440974 771 ntBASIC7.05□□□□□ -1.28
NEK3P51956 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.05□□□□□ -1.28
NEK3P51956 AL354714.5-201ENST00000450131 590 ntBASIC7.05□□□□□ -1.28
NEK3P51956 BZW1P1-201ENST00000454901 1240 ntBASIC7.05□□□□□ -1.28
NEK3P51956 AC005017.1-201ENST00000482002 490 ntBASIC7.05□□□□□ -1.28
NEK3P51956 AC096743.1-201ENST00000485172 319 ntBASIC7.05□□□□□ -1.28
NEK3P51956 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.05□□□□□ -1.28
NEK3P51956 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.05□□□□□ -1.28
NEK3P51956 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC7.05□□□□□ -1.28
NEK3P51956 OR4V1P-201ENST00000525394 1140 ntBASIC7.05□□□□□ -1.28
NEK3P51956 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.05□□□□□ -1.28
NEK3P51956 AP002004.1-206ENST00000532441 876 ntBASIC7.05□□□□□ -1.28
NEK3P51956 AC027667.1-201ENST00000545814 304 ntBASIC7.05□□□□□ -1.28
NEK3P51956 HMGN1P26-201ENST00000558737 303 ntBASIC7.05□□□□□ -1.28
NEK3P51956 AL132640.1-201ENST00000559594 619 ntBASIC7.05□□□□□ -1.28
NEK3P51956 AC010287.1-201ENST00000566916 357 ntBASIC7.05□□□□□ -1.28
NEK3P51956 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC7.05□□□□□ -1.28
NEK3P51956 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.05□□□□□ -1.28
NEK3P51956 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC7.05□□□□□ -1.28
NEK3P51956 AC111186.1-201ENST00000604684 130 ntBASIC7.05□□□□□ -1.28
NEK3P51956 OR51C1P-201ENST00000608504 942 ntBASIC7.05□□□□□ -1.28
NEK3P51956 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
NEK3P51956 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 SAMM50P1-201ENST00000455403 1399 ntBASIC7.05□□□□□ -1.28
NEK3P51956 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.05□□□□□ -1.28
NEK3P51956 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.05□□□□□ -1.28
NEK3P51956 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEK3P51956 CDY19P-201ENST00000411668 1613 ntBASIC7.05□□□□□ -1.28
NEK3P51956 CDY18P-201ENST00000438294 1609 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms