Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RN7SKP183-201ENST00000517169 324 ntBASIC6.9□□□□□ -1.3
LHX1P48742 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.9□□□□□ -1.3
LHX1P48742 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.9□□□□□ -1.3
LHX1P48742 AL589863.1-201ENST00000595383 631 ntBASIC6.9□□□□□ -1.3
LHX1P48742 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.9□□□□□ -1.3
LHX1P48742 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.9□□□□□ -1.3
LHX1P48742 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.9□□□□□ -1.3
LHX1P48742 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.9□□□□□ -1.3
LHX1P48742 AL122023.1-201ENST00000622847 530 ntBASIC6.9□□□□□ -1.3
LHX1P48742 AC073862.4-201ENST00000622982 854 ntBASIC6.9□□□□□ -1.3
LHX1P48742 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.9□□□□□ -1.3
LHX1P48742 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
LHX1P48742 AC010624.4-201ENST00000597606 1351 ntBASIC6.9□□□□□ -1.31
LHX1P48742 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.9□□□□□ -1.31
LHX1P48742 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
LHX1P48742 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LHX1P48742 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.9□□□□□ -1.31
LHX1P48742 AC090181.3-201ENST00000624777 1514 ntBASIC6.9□□□□□ -1.31
LHX1P48742 AC011592.1-201ENST00000624647 3634 ntBASIC6.9□□□□□ -1.31
LHX1P48742 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.9□□□□□ -1.31
LHX1P48742 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LHX1P48742 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LHX1P48742 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
LHX1P48742 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.9□□□□□ -1.31
LHX1P48742 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
LHX1P48742 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LHX1P48742 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
LHX1P48742 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.89□□□□□ -1.31
LHX1P48742 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.89□□□□□ -1.31
LHX1P48742 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LHX1P48742 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
LHX1P48742 RNA5SP77-201ENST00000365394 120 ntBASIC6.89□□□□□ -1.31
LHX1P48742 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LHX1P48742 AL023284.3-201ENST00000407767 334 ntBASIC6.89□□□□□ -1.31
LHX1P48742 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX1P48742 AC010086.1-201ENST00000437359 1052 ntBASIC6.89□□□□□ -1.31
LHX1P48742 OR2L9P-201ENST00000444456 913 ntBASIC6.89□□□□□ -1.31
LHX1P48742 TIMM8BP2-201ENST00000445940 251 ntBASIC6.89□□□□□ -1.31
LHX1P48742 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX1P48742 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX1P48742 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX1P48742 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX1P48742 HMGN1P16-201ENST00000508308 283 ntBASIC6.89□□□□□ -1.31
LHX1P48742 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.89□□□□□ -1.31
LHX1P48742 RNA5SP418-201ENST00000515951 117 ntBASIC6.89□□□□□ -1.31
LHX1P48742 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.89□□□□□ -1.31
LHX1P48742 AC008055.1-201ENST00000547032 609 ntBASIC6.89□□□□□ -1.31
LHX1P48742 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.89□□□□□ -1.31
LHX1P48742 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.89□□□□□ -1.31
LHX1P48742 AC005828.7-201ENST00000607331 556 ntBASIC6.89□□□□□ -1.31
LHX1P48742 SNORA74.4-201ENST00000607595 199 ntBASIC6.89□□□□□ -1.31
LHX1P48742 MIR6780B-201ENST00000610307 79 ntBASIC6.89□□□□□ -1.31
LHX1P48742 uc_338.29-201ENST00000615099 168 ntBASIC6.89□□□□□ -1.31
LHX1P48742 AL121936.2-201ENST00000641935 662 ntBASIC6.89□□□□□ -1.31
LHX1P48742 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
LHX1P48742 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX1P48742 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
LHX1P48742 PPBPP2-201ENST00000513150 1362 ntBASIC6.89□□□□□ -1.31
LHX1P48742 AC125238.2-201ENST00000430003 1440 ntBASIC6.89□□□□□ -1.31
LHX1P48742 AC068733.2-201ENST00000605434 1418 ntBASIC6.89□□□□□ -1.31
LHX1P48742 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
LHX1P48742 SAGE3P-201ENST00000619800 1635 ntBASIC6.89□□□□□ -1.31
LHX1P48742 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.89□□□□□ -1.31
LHX1P48742 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LHX1P48742 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.89□□□□□ -1.31
LHX1P48742 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX1P48742 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LHX1P48742 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LHX1P48742 MAPK10-323ENST00000641493 3207 ntBASIC6.89□□□□□ -1.31
LHX1P48742 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX1P48742 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.89□□□□□ -1.31
LHX1P48742 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.88□□□□□ -1.31
LHX1P48742 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX1P48742 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.88□□□□□ -1.31
LHX1P48742 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.88□□□□□ -1.31
LHX1P48742 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.88□□□□□ -1.31
LHX1P48742 AL353743.3-201ENST00000442109 1468 ntBASIC6.88□□□□□ -1.31
LHX1P48742 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
LHX1P48742 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
LHX1P48742 RNA5SP350-201ENST00000363298 111 ntBASIC6.88□□□□□ -1.31
LHX1P48742 SNORD35A-201ENST00000363389 86 ntBASIC6.88□□□□□ -1.31
LHX1P48742 COX4I1P2-201ENST00000447446 547 ntBASIC6.88□□□□□ -1.31
LHX1P48742 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.88□□□□□ -1.31
LHX1P48742 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.88□□□□□ -1.31
LHX1P48742 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.88□□□□□ -1.31
LHX1P48742 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX1P48742 AC091965.3-201ENST00000506236 208 ntBASIC6.88□□□□□ -1.31
LHX1P48742 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX1P48742 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.88□□□□□ -1.31
LHX1P48742 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.88□□□□□ -1.31
LHX1P48742 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.88□□□□□ -1.31
LHX1P48742 AC105036.1-201ENST00000566222 271 ntBASIC6.88□□□□□ -1.31
LHX1P48742 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.88□□□□□ -1.31
LHX1P48742 MRPL57P1-201ENST00000621486 265 ntBASIC6.88□□□□□ -1.31
LHX1P48742 SAMMSON-214ENST00000641395 1264 ntBASIC6.88□□□□□ -1.31
LHX1P48742 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX1P48742 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX1P48742 MAPK10-383ENST00000642032 3390 ntBASIC6.88□□□□□ -1.31
LHX1P48742 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX1P48742 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms