Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 RN7SL612P-201ENST00000497704 295 ntBASIC7.13□□□□□ -1.27
UBE4BO95155 NPM1P27-201ENST00000502784 830 ntBASIC7.13□□□□□ -1.27
UBE4BO95155 AC087360.1-201ENST00000518788 616 ntBASIC7.13□□□□□ -1.27
UBE4BO95155 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.13□□□□□ -1.27
UBE4BO95155 OR9G2P-201ENST00000533326 880 ntBASIC7.13□□□□□ -1.27
UBE4BO95155 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.13□□□□□ -1.27
UBE4BO95155 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.13□□□□□ -1.27
UBE4BO95155 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.13□□□□□ -1.27
UBE4BO95155 SYPL1P2-201ENST00000582878 727 ntBASIC7.13□□□□□ -1.27
UBE4BO95155 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.13□□□□□ -1.27
UBE4BO95155 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.13□□□□□ -1.27
UBE4BO95155 AC005479.3-201ENST00000602790 431 ntBASIC7.13□□□□□ -1.27
UBE4BO95155 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.13□□□□□ -1.27
UBE4BO95155 TCL6_3.1-201ENST00000619064 137 ntBASIC7.13□□□□□ -1.27
UBE4BO95155 AL132640.3-201ENST00000630473 177 ntBASIC7.13□□□□□ -1.27
UBE4BO95155 CLUHP10-201ENST00000631979 980 ntBASIC7.13□□□□□ -1.27
UBE4BO95155 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UBE4BO95155 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.13□□□□□ -1.27
UBE4BO95155 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.13□□□□□ -1.27
UBE4BO95155 AC005702.3-201ENST00000585345 1447 ntBASIC7.13□□□□□ -1.27
UBE4BO95155 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UBE4BO95155 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
UBE4BO95155 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.13□□□□□ -1.27
UBE4BO95155 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.13□□□□□ -1.27
UBE4BO95155 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.13□□□□□ -1.27
UBE4BO95155 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UBE4BO95155 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
UBE4BO95155 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UBE4BO95155 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UBE4BO95155 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.13□□□□□ -1.27
UBE4BO95155 AL137918.1-201ENST00000624542 1922 ntBASIC7.13□□□□□ -1.27
UBE4BO95155 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UBE4BO95155 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
UBE4BO95155 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 RNU1-84P-201ENST00000365447 164 ntBASIC7.12□□□□□ -1.27
UBE4BO95155 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.12□□□□□ -1.27
UBE4BO95155 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.12□□□□□ -1.27
UBE4BO95155 NPM1P23-201ENST00000440193 849 ntBASIC7.12□□□□□ -1.27
UBE4BO95155 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.12□□□□□ -1.27
UBE4BO95155 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.12□□□□□ -1.27
UBE4BO95155 SNX18P26-201ENST00000458433 740 ntBASIC7.12□□□□□ -1.27
UBE4BO95155 AC139713.1-202ENST00000512366 460 ntBASIC7.12□□□□□ -1.27
UBE4BO95155 IGKV1D-22-201ENST00000518953 324 ntBASIC7.12□□□□□ -1.27
UBE4BO95155 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.12□□□□□ -1.27
UBE4BO95155 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.12□□□□□ -1.27
UBE4BO95155 ARGFXP2-201ENST00000579304 949 ntBASIC7.12□□□□□ -1.27
UBE4BO95155 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.12□□□□□ -1.27
UBE4BO95155 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 MIR6085-201ENST00000618314 110 ntBASIC7.12□□□□□ -1.27
UBE4BO95155 AL138693.1-201ENST00000622219 129 ntBASIC7.12□□□□□ -1.27
UBE4BO95155 AL162377.2-201ENST00000624532 337 ntBASIC7.12□□□□□ -1.27
UBE4BO95155 AC068213.1-201ENST00000625124 226 ntBASIC7.12□□□□□ -1.27
UBE4BO95155 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.12□□□□□ -1.27
UBE4BO95155 AC005034.3-201ENST00000604845 1747 ntBASIC7.12□□□□□ -1.27
UBE4BO95155 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.12□□□□□ -1.27
UBE4BO95155 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
UBE4BO95155 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
UBE4BO95155 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
UBE4BO95155 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
UBE4BO95155 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
UBE4BO95155 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.12□□□□□ -1.27
UBE4BO95155 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UBE4BO95155 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
UBE4BO95155 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.11□□□□□ -1.27
UBE4BO95155 AC112243.1-201ENST00000623949 3851 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
UBE4BO95155 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
UBE4BO95155 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
UBE4BO95155 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.11□□□□□ -1.27
UBE4BO95155 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.11□□□□□ -1.27
UBE4BO95155 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.11□□□□□ -1.27
UBE4BO95155 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
UBE4BO95155 VIM2P-201ENST00000402383 1294 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 SNORA11.3-201ENST00000408471 128 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 RN7SKP221-201ENST00000410420 301 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 MRPS21P5-201ENST00000417885 231 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.11□□□□□ -1.27
UBE4BO95155 AL445991.1-201ENST00000450381 475 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 AL034369.1-201ENST00000453808 477 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 CEACAMP11-201ENST00000455211 583 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 RN7SL502P-201ENST00000481857 290 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
UBE4BO95155 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.11□□□□□ -1.27
UBE4BO95155 AL133399.1-201ENST00000527476 298 ntBASIC7.11□□□□□ -1.27
UBE4BO95155 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.11□□□□□ -1.27
UBE4BO95155 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms