Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 ANP32BP1-202ENST00000568553 737 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 CTSLP2-201ENST00000580501 394 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC089999.3-201ENST00000622440 577 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AL354702.2-202ENST00000641481 890 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 AC009135.2-201ENST00000624136 1768 ntBASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPIPA3F8WFD2 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 RPL12P23-201ENST00000405880 490 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 SNORA81-201ENST00000408493 178 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AL359885.1-201ENST00000415786 903 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC239367.3-201ENST00000428996 814 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 OR6R1P-201ENST00000431838 940 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 RPSAP32-201ENST00000432681 526 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AL645939.3-201ENST00000435408 225 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC092106.2-201ENST00000436597 487 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 EEF1B2P3-201ENST00000447718 678 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 BZW1P1-201ENST00000454901 1240 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC236972.4-201ENST00000458091 963 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 RN7SL568P-201ENST00000493069 298 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC021146.11-201ENST00000503319 491 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 SUMO2P7-201ENST00000511179 285 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 RPL41P2-201ENST00000544920 409 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC023310.2-201ENST00000553844 547 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 FXNP1-201ENST00000555153 337 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC013731.1-201ENST00000604340 883 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AL359091.2-201ENST00000609303 556 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 RAB28P4-201ENST00000622233 665 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AL450226.2-201ENST00000622913 439 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AC120057.5-201ENST00000623840 154 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 AL035425.4-201ENST00000624509 1063 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 NCOA4P3-201ENST00000513203 1877 ntBASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPIPA3F8WFD2 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AC093278.2-201ENST00000564956 2485 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 AL022323.4-201ENST00000623980 13120 ntBASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
NPIPA3F8WFD2 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms