Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 EEF1A1P13-201ENST00000503537 1389 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 TAC1-203ENST00000350485 975 ntTSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 U6.112-201ENST00000384129 70 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 SNORA70I-201ENST00000384544 135 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 MIR654-201ENST00000385199 81 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 RPSAP42-201ENST00000403415 878 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 VTA1P1-201ENST00000414044 866 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC114760.1-201ENST00000420310 652 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 GLRXP1-201ENST00000423261 334 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 FABP7P1-201ENST00000424004 391 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 Z74696.1-201ENST00000428208 1123 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC093155.1-201ENST00000440164 826 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 TBL1YP1-201ENST00000440297 1026 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC243962.1-201ENST00000441512 579 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 MTATP6P30-201ENST00000443540 664 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 SEPT14P24-201ENST00000447236 180 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC063955.1-201ENST00000462872 685 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 RPS2P25-201ENST00000467247 580 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 RN7SL146P-201ENST00000472338 297 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC096743.1-201ENST00000485172 319 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC114964.1-201ENST00000502306 1111 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 NENFP3-201ENST00000503735 313 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 ARL2BPP6-201ENST00000512757 439 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC091175.1-201ENST00000522168 572 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC007954.1-201ENST00000554198 494 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC011260.1-201ENST00000578420 472 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 MIR4258-201ENST00000580920 91 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AL121917.2-201ENST00000605044 390 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC005377.1-201ENST00000605126 456 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC093388.1-201ENST00000609166 430 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 MTND5P42-201ENST00000637720 498 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AL391380.1-201ENST00000439300 1432 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 PWRN1-212ENST00000569908 1435 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC010680.2-201ENST00000603521 2117 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 TTC3P1-201ENST00000399586 6081 ntBASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CUEDC1Q9NWM3 AC107398.3-201ENST00000562284 7000 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 ZNF90P1-201ENST00000480493 1951 ntBASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC8.01□□□□□ -1.13
CUEDC1Q9NWM3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms