Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC009220.2-201ENST00000489759 1751 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC004014.2-201ENST00000623718 5122 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 OR7A2P-201ENST00000304105 930 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 STAG3L4-201ENST00000352103 530 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 RPL5P20-201ENST00000403848 896 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 ZNF37CP-201ENST00000406795 241 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 MEAF6P1-201ENST00000416092 327 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AL359092.1-201ENST00000417156 265 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 RANP7-201ENST00000418085 644 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 MTND2P9-201ENST00000422293 931 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC097721.1-201ENST00000427150 1253 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 OR6C71P-201ENST00000432580 913 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 BTBD7P2-201ENST00000441962 620 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 RPSAP24-201ENST00000461543 873 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC008429.2-201ENST00000523057 864 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC084337.1-201ENST00000524809 686 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC019227.1-201ENST00000526902 510 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AP003168.1-201ENST00000530091 307 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC084033.1-201ENST00000550830 633 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC026956.1-201ENST00000558741 396 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 RPL29P33-201ENST00000587474 316 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AL023583.1-201ENST00000607518 1143 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 RAB28P4-201ENST00000622233 665 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC022034.1-201ENST00000512867 2156 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC084782.1-201ENST00000564401 2465 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC105749.1-201ENST00000631338 2008 ntBASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 AC023245.2-201ENST00000530760 2978 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 VN2R1P-201ENST00000449668 1743 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AP000568.1-201ENST00000282964 442 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 RNA5SP140-201ENST00000364524 92 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AL353133.1-201ENST00000407695 401 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 RNA5SP231-201ENST00000410496 138 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AL929472.1-201ENST00000417484 429 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AL672212.1-201ENST00000422246 400 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 SPATA20P1-201ENST00000423089 438 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 PTPN2P1-201ENST00000423212 1072 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 RPS10P14-201ENST00000440748 502 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 SLAMF6P1-201ENST00000451067 602 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 TREML3P-201ENST00000457327 501 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 CCNJP2-201ENST00000457810 1163 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AL121579.2-201ENST00000555466 590 ntBASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.48□□□□□ -1.37
ZNF549Q6P9A3 AC074141.1-201ENST00000588129 2995 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms