Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
TPM4P67936 AC004656.1-201ENST00000568479 4951 ntBASIC7.23□□□□□ -1.25
TPM4P67936 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.23□□□□□ -1.25
TPM4P67936 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
TPM4P67936 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TPM4P67936 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM4P67936 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
TPM4P67936 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TPM4P67936 AC110373.1-201ENST00000505994 3505 ntBASIC7.22□□□□□ -1.25
TPM4P67936 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TPM4P67936 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM4P67936 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.22□□□□□ -1.25
TPM4P67936 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.22□□□□□ -1.25
TPM4P67936 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC7.22□□□□□ -1.25
TPM4P67936 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.22□□□□□ -1.25
TPM4P67936 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
TPM4P67936 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC7.22□□□□□ -1.25
TPM4P67936 UBE2V1P14-201ENST00000415815 558 ntBASIC7.22□□□□□ -1.25
TPM4P67936 AL929472.1-201ENST00000417484 429 ntBASIC7.22□□□□□ -1.25
TPM4P67936 OSTCP2-201ENST00000437956 444 ntBASIC7.22□□□□□ -1.25
TPM4P67936 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.22□□□□□ -1.25
TPM4P67936 RN7SL445P-201ENST00000495609 293 ntBASIC7.22□□□□□ -1.25
TPM4P67936 OR4H6P-201ENST00000563771 921 ntBASIC7.22□□□□□ -1.25
TPM4P67936 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM4P67936 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.22□□□□□ -1.25
TPM4P67936 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.22□□□□□ -1.25
TPM4P67936 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.22□□□□□ -1.25
TPM4P67936 DIMT1P1-201ENST00000603970 763 ntBASIC7.22□□□□□ -1.25
TPM4P67936 BX005040.2-201ENST00000620504 370 ntBASIC7.22□□□□□ -1.25
TPM4P67936 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.22□□□□□ -1.25
TPM4P67936 AC135068.11-201ENST00000636378 921 ntBASIC7.22□□□□□ -1.25
TPM4P67936 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
TPM4P67936 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
TPM4P67936 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TPM4P67936 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TPM4P67936 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
TPM4P67936 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
TPM4P67936 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM4P67936 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TPM4P67936 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
TPM4P67936 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
TPM4P67936 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.21□□□□□ -1.25
TPM4P67936 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
TPM4P67936 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
TPM4P67936 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
TPM4P67936 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
TPM4P67936 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.21□□□□□ -1.25
TPM4P67936 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TPM4P67936 RNU1-59P-201ENST00000364829 162 ntBASIC7.21□□□□□ -1.26
TPM4P67936 PDCL3P5-201ENST00000398028 722 ntBASIC7.21□□□□□ -1.26
TPM4P67936 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.21□□□□□ -1.26
TPM4P67936 AL359092.1-201ENST00000417156 265 ntBASIC7.21□□□□□ -1.26
TPM4P67936 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TPM4P67936 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
TPM4P67936 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TPM4P67936 AC021876.1-201ENST00000425959 359 ntBASIC7.21□□□□□ -1.26
TPM4P67936 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
TPM4P67936 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TPM4P67936 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.21□□□□□ -1.26
TPM4P67936 AL022237.1-201ENST00000446663 358 ntBASIC7.21□□□□□ -1.26
TPM4P67936 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
TPM4P67936 AC103563.5-201ENST00000455643 364 ntBASIC7.21□□□□□ -1.26
TPM4P67936 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM4P67936 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM4P67936 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
TPM4P67936 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.21□□□□□ -1.26
TPM4P67936 OR52H2P-201ENST00000514607 902 ntBASIC7.21□□□□□ -1.26
TPM4P67936 IGKV1D-22-201ENST00000518953 324 ntBASIC7.21□□□□□ -1.26
TPM4P67936 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.21□□□□□ -1.26
TPM4P67936 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.21□□□□□ -1.26
TPM4P67936 AC008429.2-201ENST00000523057 864 ntBASIC7.21□□□□□ -1.26
TPM4P67936 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM4P67936 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM4P67936 MIR4262-201ENST00000578394 54 ntBASIC7.21□□□□□ -1.26
TPM4P67936 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM4P67936 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM4P67936 PRR13P3-201ENST00000603578 376 ntBASIC7.21□□□□□ -1.26
TPM4P67936 AL161931.1-201ENST00000612768 246 ntBASIC7.21□□□□□ -1.26
TPM4P67936 U1.25-201ENST00000614085 162 ntBASIC7.21□□□□□ -1.26
TPM4P67936 U1.34-201ENST00000618578 162 ntBASIC7.21□□□□□ -1.26
TPM4P67936 U1.31-201ENST00000620022 160 ntBASIC7.21□□□□□ -1.26
TPM4P67936 Z95114.1-201ENST00000624264 14574 ntBASIC7.21□□□□□ -1.26
TPM4P67936 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.21□□□□□ -1.26
TPM4P67936 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TPM4P67936 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.21□□□□□ -1.26
TPM4P67936 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
TPM4P67936 AP002833.3-201ENST00000625075 2265 ntBASIC7.21□□□□□ -1.26
TPM4P67936 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.21□□□□□ -1.26
TPM4P67936 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TPM4P67936 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.21□□□□□ -1.26
TPM4P67936 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TPM4P67936 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TPM4P67936 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TPM4P67936 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TPM4P67936 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC7.2□□□□□ -1.26
TPM4P67936 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
TPM4P67936 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
TPM4P67936 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.2□□□□□ -1.26
TPM4P67936 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TPM4P67936 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms