Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SNORA38B-201ENST00000363524 131 ntBASIC6.4□□□□□ -1.38
CDH13P55290 EEF1GP6-201ENST00000402309 905 ntBASIC6.4□□□□□ -1.38
CDH13P55290 AL590635.1-201ENST00000406314 586 ntBASIC6.4□□□□□ -1.38
CDH13P55290 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH13P55290 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH13P55290 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH13P55290 PPIAP23-201ENST00000420099 497 ntBASIC6.4□□□□□ -1.38
CDH13P55290 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH13P55290 SNRPBP1-201ENST00000443634 282 ntBASIC6.4□□□□□ -1.38
CDH13P55290 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.4□□□□□ -1.38
CDH13P55290 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH13P55290 CCNJP2-201ENST00000457810 1163 ntBASIC6.4□□□□□ -1.38
CDH13P55290 AC236972.4-201ENST00000458091 963 ntBASIC6.4□□□□□ -1.38
CDH13P55290 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.38
CDH13P55290 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH13P55290 RN7SL849P-201ENST00000485236 295 ntBASIC6.4□□□□□ -1.38
CDH13P55290 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.4□□□□□ -1.38
CDH13P55290 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH13P55290 AC084337.1-201ENST00000524809 686 ntBASIC6.4□□□□□ -1.38
CDH13P55290 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH13P55290 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH13P55290 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
CDH13P55290 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH13P55290 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH13P55290 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH13P55290 RN7SL426P-201ENST00000579106 295 ntBASIC6.4□□□□□ -1.38
CDH13P55290 AC024085.1-201ENST00000604299 432 ntBASIC6.4□□□□□ -1.38
CDH13P55290 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH13P55290 AP005212.4-201ENST00000614206 710 ntBASIC6.4□□□□□ -1.38
CDH13P55290 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH13P55290 MIR6829-201ENST00000620375 67 ntBASIC6.4□□□□□ -1.38
CDH13P55290 AL121985.3-201ENST00000620690 523 ntBASIC6.4□□□□□ -1.38
CDH13P55290 MRPL57P1-201ENST00000621486 265 ntBASIC6.4□□□□□ -1.38
CDH13P55290 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH13P55290 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH13P55290 CR383656.5-201ENST00000547616 1340 ntBASIC6.4□□□□□ -1.39
CDH13P55290 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.4□□□□□ -1.39
CDH13P55290 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDH13P55290 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.4□□□□□ -1.39
CDH13P55290 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.4□□□□□ -1.39
CDH13P55290 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.4□□□□□ -1.39
CDH13P55290 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CDH13P55290 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CDH13P55290 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 AL161901.1-201ENST00000624954 3425 ntBASIC6.39□□□□□ -1.39
CDH13P55290 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 AL080312.1-201ENST00000256654 824 ntBASIC6.39□□□□□ -1.39
CDH13P55290 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CDH13P55290 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CDH13P55290 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 RANP7-201ENST00000418085 644 ntBASIC6.39□□□□□ -1.39
CDH13P55290 VN1R3-201ENST00000418822 919 ntBASIC6.39□□□□□ -1.39
CDH13P55290 AC000089.1-201ENST00000424559 801 ntBASIC6.39□□□□□ -1.39
CDH13P55290 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH13P55290 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 UBE2V2P1-201ENST00000434717 398 ntBASIC6.39□□□□□ -1.39
CDH13P55290 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH13P55290 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH13P55290 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH13P55290 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH13P55290 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.39□□□□□ -1.39
CDH13P55290 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.39□□□□□ -1.39
CDH13P55290 AP005902.2-201ENST00000518393 307 ntBASIC6.39□□□□□ -1.39
CDH13P55290 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.39□□□□□ -1.39
CDH13P55290 AP001994.1-201ENST00000527539 826 ntBASIC6.39□□□□□ -1.39
CDH13P55290 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH13P55290 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CDH13P55290 AC084033.1-201ENST00000550830 633 ntBASIC6.39□□□□□ -1.39
CDH13P55290 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 AC126323.4-201ENST00000566935 234 ntBASIC6.39□□□□□ -1.39
CDH13P55290 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 AC009283.1-201ENST00000615852 645 ntBASIC6.39□□□□□ -1.39
CDH13P55290 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.39□□□□□ -1.39
CDH13P55290 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 AC073488.9-201ENST00000631601 754 ntBASIC6.39□□□□□ -1.39
CDH13P55290 AC233968.1-201ENST00000611212 1300 ntBASIC6.39□□□□□ -1.39
CDH13P55290 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH13P55290 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH13P55290 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CDH13P55290 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.39□□□□□ -1.39
CDH13P55290 AC095038.1-201ENST00000429248 1591 ntBASIC6.39□□□□□ -1.39
CDH13P55290 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms