Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.9□□□□□ -1.47
FREM3P0C091 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.9□□□□□ -1.47
FREM3P0C091 AC121758.1-202ENST00000556917 658 ntBASIC5.9□□□□□ -1.47
FREM3P0C091 AC244034.2-201ENST00000562504 509 ntBASIC5.9□□□□□ -1.47
FREM3P0C091 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.9□□□□□ -1.47
FREM3P0C091 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.9□□□□□ -1.47
FREM3P0C091 SYPL1P2-201ENST00000582878 727 ntBASIC5.9□□□□□ -1.47
FREM3P0C091 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.9□□□□□ -1.47
FREM3P0C091 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.9□□□□□ -1.47
FREM3P0C091 AC114546.4-201ENST00000624413 369 ntBASIC5.9□□□□□ -1.47
FREM3P0C091 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
FREM3P0C091 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
FREM3P0C091 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.47
FREM3P0C091 AC009120.2-204ENST00000621548 2032 ntBASIC5.9□□□□□ -1.47
FREM3P0C091 CDY10P-201ENST00000452415 1567 ntBASIC5.9□□□□□ -1.47
FREM3P0C091 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
FREM3P0C091 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
FREM3P0C091 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
FREM3P0C091 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.89□□□□□ -1.47
FREM3P0C091 AL359694.2-201ENST00000567753 1615 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.89□□□□□ -1.47
FREM3P0C091 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
FREM3P0C091 AC005332.9-201ENST00000620266 2921 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
FREM3P0C091 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
FREM3P0C091 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
FREM3P0C091 RNA5SP485-201ENST00000365053 119 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
FREM3P0C091 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.89□□□□□ -1.47
FREM3P0C091 AC092865.3-201ENST00000425390 1026 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 CCNJP2-201ENST00000457810 1163 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.89□□□□□ -1.47
FREM3P0C091 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.89□□□□□ -1.47
FREM3P0C091 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.89□□□□□ -1.47
FREM3P0C091 AC008055.1-201ENST00000547032 609 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.89□□□□□ -1.47
FREM3P0C091 AC011500.1-201ENST00000601963 469 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.89□□□□□ -1.47
FREM3P0C091 AC010998.3-201ENST00000613871 631 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 AC089999.3-201ENST00000622440 577 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
FREM3P0C091 AL391261.1-201ENST00000555712 1479 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
FREM3P0C091 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC5.89□□□□□ -1.47
FREM3P0C091 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
FREM3P0C091 AC025809.2-201ENST00000625085 1802 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
FREM3P0C091 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.89□□□□□ -1.47
FREM3P0C091 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.89□□□□□ -1.47
FREM3P0C091 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
FREM3P0C091 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
FREM3P0C091 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.89□□□□□ -1.47
FREM3P0C091 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
FREM3P0C091 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
FREM3P0C091 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
FREM3P0C091 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
FREM3P0C091 RN7SKP86-201ENST00000410454 332 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.89□□□□□ -1.47
FREM3P0C091 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.89□□□□□ -1.47
FREM3P0C091 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.89□□□□□ -1.47
FREM3P0C091 AL354707.3-201ENST00000427308 331 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 RPSAP32-201ENST00000432681 526 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.89□□□□□ -1.47
FREM3P0C091 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.89□□□□□ -1.47
FREM3P0C091 RPL19P11-201ENST00000495944 589 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 AC079905.1-201ENST00000549280 475 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 RPL3P13-201ENST00000550415 216 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.89□□□□□ -1.47
FREM3P0C091 AC106785.4-201ENST00000569492 412 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.89□□□□□ -1.47
FREM3P0C091 AC073488.9-201ENST00000631601 754 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 AL121936.2-201ENST00000641935 662 ntBASIC5.89□□□□□ -1.47
FREM3P0C091 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
FREM3P0C091 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC5.88□□□□□ -1.47
FREM3P0C091 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 AC009948.3-201ENST00000603415 1798 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC5.88□□□□□ -1.47
FREM3P0C091 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 AL049697.3-201ENST00000406493 982 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 U3.43-201ENST00000410734 213 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.88□□□□□ -1.47
FREM3P0C091 AC239367.3-201ENST00000428996 814 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.88□□□□□ -1.47
FREM3P0C091 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.88□□□□□ -1.47
FREM3P0C091 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.88□□□□□ -1.47
FREM3P0C091 RPL5P10-201ENST00000445207 894 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 AC118758.1-202ENST00000454719 225 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.88□□□□□ -1.47
FREM3P0C091 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.88□□□□□ -1.47
FREM3P0C091 CYCSP25-201ENST00000525280 316 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 OR4A41P-201ENST00000533053 928 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.88□□□□□ -1.47
FREM3P0C091 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms