Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC66A2RUB6 AL121949.2-201ENST00000403446 1548 ntBASIC7.52□□□□□ -1.2
CCDC66A2RUB6 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.52□□□□□ -1.2
CCDC66A2RUB6 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.52□□□□□ -1.2
CCDC66A2RUB6 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.52□□□□□ -1.2
CCDC66A2RUB6 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.52□□□□□ -1.2
CCDC66A2RUB6 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CCDC66A2RUB6 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 DOCK11P1-201ENST00000553480 5932 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC104837.1-201ENST00000444644 1587 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 RPL12P13-201ENST00000310055 497 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 OR4K17-201ENST00000315543 1032 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 SNORA73B-201ENST00000363217 204 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 RNA5SP427-201ENST00000365323 119 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 MIR122-201ENST00000385044 85 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 TRAV35-201ENST00000390462 330 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 DUTP4-201ENST00000424782 475 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 UBE2D3P3-201ENST00000426992 425 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC114973.1-201ENST00000429057 632 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 HBBP1-201ENST00000433329 439 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 HMGN1P6-201ENST00000438508 291 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 HMGN1P5-201ENST00000448591 263 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 RPL34P22-201ENST00000468193 318 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC108729.2-201ENST00000476543 840 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 RPS14P8-201ENST00000478778 369 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AP005202.1-201ENST00000489915 867 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC008040.4-201ENST00000494834 768 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 MTCO2P9-201ENST00000503214 694 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 TECRP2-201ENST00000503270 928 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 LINC01085-203ENST00000511195 326 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC126177.6-201ENST00000550420 1009 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 OR7E94P-202ENST00000601375 790 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC108451.2-201ENST00000603875 538 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AL450270.1-201ENST00000606160 391 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC010329.1-201ENST00000593903 8328 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 ASNSP6-201ENST00000592770 1618 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC110792.3-201ENST00000595906 1614 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 DDX6P1-205ENST00000441966 1436 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 CCNT2P1-201ENST00000423082 1315 ntBASIC7.52□□□□□ -1.21
CCDC66A2RUB6 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC66A2RUB6 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.51□□□□□ -1.21
CCDC66A2RUB6 AL592429.1-201ENST00000403909 1473 ntBASIC7.51□□□□□ -1.21
CCDC66A2RUB6 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC66A2RUB6 U3.1-201ENST00000362500 215 ntBASIC7.51□□□□□ -1.21
CCDC66A2RUB6 AC007618.1-201ENST00000366455 732 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms