Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AFG3L1P-217ENST00000557444 2447 ntBASIC19.73■□□□□ 0.75
VPS9D1Q9Y2B5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
VPS9D1Q9Y2B5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS9D1Q9Y2B5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS9D1Q9Y2B5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS9D1Q9Y2B5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 GUSBP6-202ENST00000438529 1198 ntBASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 AC091874.3-201ENST00000512672 1195 ntBASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS9D1Q9Y2B5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 AC005829.2-201ENST00000571422 1056 ntBASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VPS9D1Q9Y2B5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 AC097658.1-201ENST00000475555 843 ntBASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS9D1Q9Y2B5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms