Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AC121338.2-201ENST00000622535 1744 ntBASIC25.39■■□□□ 1.65
CCNL1Q9UK58 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCNL1Q9UK58 AC116351.2-201ENST00000606540 1585 ntBASIC25.39■■□□□ 1.65
CCNL1Q9UK58 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCNL1Q9UK58 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 TFP1-202ENST00000475455 1573 ntBASIC25.38■■□□□ 1.65
CCNL1Q9UK58 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNL1Q9UK58 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 AC093458.2-201ENST00000623150 629 ntBASIC25.37■■□□□ 1.65
CCNL1Q9UK58 AC011558.1-201ENST00000623459 338 ntBASIC25.37■■□□□ 1.65
CCNL1Q9UK58 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNL1Q9UK58 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 IER3-202ENST00000376377 1350 ntBASIC25.36■■□□□ 1.65
CCNL1Q9UK58 AC096733.2-201ENST00000609937 1394 ntBASIC25.36■■□□□ 1.65
CCNL1Q9UK58 AC026396.1-201ENST00000419388 421 ntBASIC25.36■■□□□ 1.65
CCNL1Q9UK58 SLC25A1P2-201ENST00000430693 912 ntBASIC25.36■■□□□ 1.65
CCNL1Q9UK58 AC007663.1-201ENST00000438948 1240 ntBASIC25.36■■□□□ 1.65
CCNL1Q9UK58 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 AC141257.4-201ENST00000634557 245 ntBASIC25.36■■□□□ 1.65
CCNL1Q9UK58 AC136944.6-201ENST00000634818 245 ntBASIC25.36■■□□□ 1.65
CCNL1Q9UK58 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CCNL1Q9UK58 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CCNL1Q9UK58 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.35■■□□□ 1.65
CCNL1Q9UK58 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNL1Q9UK58 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNL1Q9UK58 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CCNL1Q9UK58 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC25.35■■□□□ 1.65
CCNL1Q9UK58 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.35■■□□□ 1.65
CCNL1Q9UK58 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.35■■□□□ 1.65
CCNL1Q9UK58 AC010653.2-201ENST00000623505 997 ntBASIC25.35■■□□□ 1.65
CCNL1Q9UK58 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
CCNL1Q9UK58 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.35■■□□□ 1.65
CCNL1Q9UK58 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNL1Q9UK58 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 AC004951.3-201ENST00000418645 1148 ntBASIC25.34■■□□□ 1.65
CCNL1Q9UK58 AL450487.1-201ENST00000426799 995 ntBASIC25.34■■□□□ 1.65
CCNL1Q9UK58 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCNL1Q9UK58 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNL1Q9UK58 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.33■■□□□ 1.65
CCNL1Q9UK58 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCNL1Q9UK58 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.33■■□□□ 1.65
CCNL1Q9UK58 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC25.33■■□□□ 1.65
CCNL1Q9UK58 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.33■■□□□ 1.65
CCNL1Q9UK58 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC25.33■■□□□ 1.65
CCNL1Q9UK58 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC25.33■■□□□ 1.65
CCNL1Q9UK58 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC25.33■■□□□ 1.65
CCNL1Q9UK58 AC244015.2-201ENST00000616358 1861 ntBASIC25.33■■□□□ 1.65
CCNL1Q9UK58 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms