Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 RPS2P52-201ENST00000469610 820 ntBASIC20.96■□□□□ 0.95
LHX5Q9H2C1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 UNC93B5-201ENST00000530315 699 ntBASIC20.96■□□□□ 0.95
LHX5Q9H2C1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 KRT18P29-201ENST00000397031 1267 ntBASIC20.95■□□□□ 0.94
LHX5Q9H2C1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 UNC93B4-201ENST00000505679 747 ntBASIC20.95■□□□□ 0.94
LHX5Q9H2C1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 ITM2C-210ENST00000620962 501 ntBASIC20.95■□□□□ 0.94
LHX5Q9H2C1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 AC066615.1-201ENST00000640911 628 ntBASIC20.95■□□□□ 0.94
LHX5Q9H2C1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LHX5Q9H2C1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 TFP1-202ENST00000475455 1573 ntBASIC20.94■□□□□ 0.94
LHX5Q9H2C1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 SOX15-203ENST00000570788 1093 ntBASIC20.94■□□□□ 0.94
LHX5Q9H2C1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LHX5Q9H2C1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 AC008687.6-201ENST00000596318 630 ntBASIC20.93■□□□□ 0.94
LHX5Q9H2C1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.93■□□□□ 0.94
LHX5Q9H2C1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms