Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 AC124283.5-201ENST00000624661 1809 ntBASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 AC009237.14-201ENST00000609975 1594 ntBASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 RN7SL471P-201ENST00000580476 299 ntBASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 TFP1-202ENST00000475455 1573 ntBASIC20.68■□□□□ 0.9
TRIM62Q9BVG3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM62Q9BVG3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 AC239809.2-201ENST00000415381 517 ntBASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM62Q9BVG3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 TCF3P1-201ENST00000423021 1937 ntBASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 AP006587.1-201ENST00000534129 1502 ntBASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM62Q9BVG3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms