Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40CQ96S21 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40CQ96S21 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40CQ96S21 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40CQ96S21 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40CQ96S21 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40CQ96S21 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40CQ96S21 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40CQ96S21 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40CQ96S21 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40CQ96S21 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 AC010141.2-201ENST00000452426 721 ntBASIC16.06■□□□□ 0.16
RAB40CQ96S21 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40CQ96S21 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RAB40CQ96S21 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 AL138781.2-201ENST00000617896 1843 ntBASIC16.05■□□□□ 0.16
RAB40CQ96S21 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40CQ96S21 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40CQ96S21 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40CQ96S21 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40CQ96S21 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40CQ96S21 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40CQ96S21 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 MIR638-201ENST00000385237 100 ntBASIC16.05■□□□□ 0.16
RAB40CQ96S21 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40CQ96S21 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40CQ96S21 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.05■□□□□ 0.16
RAB40CQ96S21 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB40CQ96S21 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RAB40CQ96S21 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.04■□□□□ 0.16
RAB40CQ96S21 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RAB40CQ96S21 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40CQ96S21 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB40CQ96S21 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.04■□□□□ 0.16
RAB40CQ96S21 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.04■□□□□ 0.16
RAB40CQ96S21 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 PGM5P4-201ENST00000421970 445 ntBASIC16.04■□□□□ 0.16
RAB40CQ96S21 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RAB40CQ96S21 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40CQ96S21 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 BCL2-203ENST00000589955 5011 ntBASIC16.04■□□□□ 0.16
RAB40CQ96S21 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40CQ96S21 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40CQ96S21 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB40CQ96S21 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40CQ96S21 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms