Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 AL355075.4-201ENST00000554988 638 ntBASIC21.09■□□□□ 0.97
SUSD3Q96L08 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.09■□□□□ 0.97
SUSD3Q96L08 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.09■□□□□ 0.97
SUSD3Q96L08 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUSD3Q96L08 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.09■□□□□ 0.97
SUSD3Q96L08 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.09■□□□□ 0.97
SUSD3Q96L08 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUSD3Q96L08 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
SUSD3Q96L08 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUSD3Q96L08 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SUSD3Q96L08 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SUSD3Q96L08 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SUSD3Q96L08 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SUSD3Q96L08 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SUSD3Q96L08 NIFKP9-201ENST00000419265 221 ntBASIC21.08■□□□□ 0.97
SUSD3Q96L08 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SUSD3Q96L08 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.08■□□□□ 0.97
SUSD3Q96L08 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
SUSD3Q96L08 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SUSD3Q96L08 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.08■□□□□ 0.97
SUSD3Q96L08 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.08■□□□□ 0.97
SUSD3Q96L08 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.08■□□□□ 0.97
SUSD3Q96L08 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.08■□□□□ 0.97
SUSD3Q96L08 AP003071.4-201ENST00000562276 1284 ntBASIC21.08■□□□□ 0.97
SUSD3Q96L08 REXO1L12P-201ENST00000622156 912 ntBASIC21.08■□□□□ 0.97
SUSD3Q96L08 AC073314.1-201ENST00000568729 2216 ntBASIC21.08■□□□□ 0.96
SUSD3Q96L08 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SUSD3Q96L08 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SUSD3Q96L08 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.07■□□□□ 0.96
SUSD3Q96L08 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.07■□□□□ 0.96
SUSD3Q96L08 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SUSD3Q96L08 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUSD3Q96L08 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.07■□□□□ 0.96
SUSD3Q96L08 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUSD3Q96L08 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SUSD3Q96L08 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.07■□□□□ 0.96
SUSD3Q96L08 AL355355.2-201ENST00000442321 338 ntBASIC21.07■□□□□ 0.96
SUSD3Q96L08 KRT18P16-201ENST00000510337 1294 ntBASIC21.07■□□□□ 0.96
SUSD3Q96L08 C1QL1P1-201ENST00000568105 661 ntBASIC21.07■□□□□ 0.96
SUSD3Q96L08 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUSD3Q96L08 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.07■□□□□ 0.96
SUSD3Q96L08 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SUSD3Q96L08 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SUSD3Q96L08 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUSD3Q96L08 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SUSD3Q96L08 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUSD3Q96L08 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUSD3Q96L08 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SUSD3Q96L08 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUSD3Q96L08 KSR1P1-201ENST00000446298 240 ntBASIC21.06■□□□□ 0.96
SUSD3Q96L08 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUSD3Q96L08 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUSD3Q96L08 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUSD3Q96L08 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUSD3Q96L08 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SUSD3Q96L08 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SUSD3Q96L08 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.05■□□□□ 0.96
SUSD3Q96L08 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUSD3Q96L08 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SUSD3Q96L08 AP005212.1-201ENST00000581547 1997 ntBASIC21.05■□□□□ 0.96
SUSD3Q96L08 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.05■□□□□ 0.96
SUSD3Q96L08 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUSD3Q96L08 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SUSD3Q96L08 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.05■□□□□ 0.96
SUSD3Q96L08 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.05■□□□□ 0.96
SUSD3Q96L08 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.05■□□□□ 0.96
SUSD3Q96L08 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SUSD3Q96L08 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SUSD3Q96L08 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUSD3Q96L08 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUSD3Q96L08 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SUSD3Q96L08 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SUSD3Q96L08 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SUSD3Q96L08 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUSD3Q96L08 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.04■□□□□ 0.96
SUSD3Q96L08 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUSD3Q96L08 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.04■□□□□ 0.96
SUSD3Q96L08 NUDT16P1-203ENST00000513809 620 ntBASIC21.04■□□□□ 0.96
SUSD3Q96L08 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.04■□□□□ 0.96
SUSD3Q96L08 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SUSD3Q96L08 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.04■□□□□ 0.96
SUSD3Q96L08 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.04■□□□□ 0.96
SUSD3Q96L08 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SUSD3Q96L08 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SUSD3Q96L08 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SUSD3Q96L08 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.04■□□□□ 0.96
SUSD3Q96L08 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUSD3Q96L08 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms