Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.03■□□□□ 0.48
HPS1Q92902 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.03■□□□□ 0.48
HPS1Q92902 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HPS1Q92902 AC026185.1-201ENST00000445748 174 ntBASIC18.03■□□□□ 0.48
HPS1Q92902 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.03■□□□□ 0.48
HPS1Q92902 AC073111.5-205ENST00000641717 521 ntBASIC18.03■□□□□ 0.48
HPS1Q92902 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.03■□□□□ 0.48
HPS1Q92902 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.03■□□□□ 0.48
HPS1Q92902 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HPS1Q92902 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HPS1Q92902 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HPS1Q92902 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
HPS1Q92902 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HPS1Q92902 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HPS1Q92902 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
HPS1Q92902 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.02■□□□□ 0.48
HPS1Q92902 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.02■□□□□ 0.48
HPS1Q92902 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 CDCA4P2-201ENST00000441182 718 ntBASIC18.02■□□□□ 0.48
HPS1Q92902 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.02■□□□□ 0.48
HPS1Q92902 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.02■□□□□ 0.48
HPS1Q92902 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.02■□□□□ 0.48
HPS1Q92902 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.02■□□□□ 0.48
HPS1Q92902 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.02■□□□□ 0.48
HPS1Q92902 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.02■□□□□ 0.48
HPS1Q92902 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.02■□□□□ 0.48
HPS1Q92902 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.02■□□□□ 0.48
HPS1Q92902 RAP2CP1-201ENST00000605103 478 ntBASIC18.02■□□□□ 0.48
HPS1Q92902 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.02■□□□□ 0.48
HPS1Q92902 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.02■□□□□ 0.48
HPS1Q92902 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPS1Q92902 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HPS1Q92902 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
HPS1Q92902 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HPS1Q92902 PCDHB18P-201ENST00000524813 2368 ntBASIC18.02■□□□□ 0.47
HPS1Q92902 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.02■□□□□ 0.47
HPS1Q92902 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 AL512408.1-201ENST00000569378 2000 ntBASIC18.01■□□□□ 0.47
HPS1Q92902 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HPS1Q92902 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.01■□□□□ 0.47
HPS1Q92902 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.01■□□□□ 0.47
HPS1Q92902 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.01■□□□□ 0.47
HPS1Q92902 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.01■□□□□ 0.47
HPS1Q92902 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.01■□□□□ 0.47
HPS1Q92902 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.01■□□□□ 0.47
HPS1Q92902 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.01■□□□□ 0.47
HPS1Q92902 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.01■□□□□ 0.47
HPS1Q92902 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HPS1Q92902 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.01■□□□□ 0.47
HPS1Q92902 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 AL162377.1-201ENST00000618844 1793 ntBASIC18.01■□□□□ 0.47
HPS1Q92902 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.01■□□□□ 0.47
HPS1Q92902 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS1Q92902 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.01■□□□□ 0.47
HPS1Q92902 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.01■□□□□ 0.47
HPS1Q92902 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HPS1Q92902 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPS1Q92902 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18■□□□□ 0.47
HPS1Q92902 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
HPS1Q92902 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPS1Q92902 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms