Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRQ92834 KRT16P6-202ENST00000425692 1426 ntBASIC24.53■■□□□ 1.52
RPGRQ92834 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRQ92834 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRQ92834 AC004980.1-204ENST00000429707 299 ntBASIC24.53■■□□□ 1.52
RPGRQ92834 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.53■■□□□ 1.52
RPGRQ92834 TUBB8P6-201ENST00000436895 1288 ntBASIC24.53■■□□□ 1.52
RPGRQ92834 AC131212.4-201ENST00000623606 975 ntBASIC24.53■■□□□ 1.52
RPGRQ92834 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.53■■□□□ 1.52
RPGRQ92834 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRQ92834 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
RPGRQ92834 EP400NL-214ENST00000641289 2402 ntBASIC24.53■■□□□ 1.52
RPGRQ92834 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
RPGRQ92834 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC24.52■■□□□ 1.52
RPGRQ92834 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.52■■□□□ 1.52
RPGRQ92834 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
RPGRQ92834 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.52■■□□□ 1.52
RPGRQ92834 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.52■■□□□ 1.52
RPGRQ92834 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
RPGRQ92834 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 TSPY14P-201ENST00000303979 915 ntBASIC24.52■■□□□ 1.52
RPGRQ92834 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 PRR31-201ENST00000371629 978 ntTSL 2 BASIC24.52■■□□□ 1.52
RPGRQ92834 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.52■■□□□ 1.52
RPGRQ92834 KRT18P16-201ENST00000510337 1294 ntBASIC24.52■■□□□ 1.52
RPGRQ92834 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC24.52■■□□□ 1.52
RPGRQ92834 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.52■■□□□ 1.52
RPGRQ92834 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.52■■□□□ 1.52
RPGRQ92834 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.52■■□□□ 1.52
RPGRQ92834 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.52■■□□□ 1.52
RPGRQ92834 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.52■■□□□ 1.52
RPGRQ92834 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRQ92834 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
RPGRQ92834 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 AC018553.1-201ENST00000616682 1458 ntBASIC24.51■■□□□ 1.51
RPGRQ92834 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
RPGRQ92834 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.51■■□□□ 1.51
RPGRQ92834 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC24.51■■□□□ 1.51
RPGRQ92834 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
RPGRQ92834 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.51■■□□□ 1.51
RPGRQ92834 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.51■■□□□ 1.51
RPGRQ92834 AC006011.2-201ENST00000621313 1158 ntBASIC24.51■■□□□ 1.51
RPGRQ92834 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.51■■□□□ 1.51
RPGRQ92834 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.51■■□□□ 1.51
RPGRQ92834 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.51■■□□□ 1.51
RPGRQ92834 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRQ92834 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPGRQ92834 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPGRQ92834 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
RPGRQ92834 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPGRQ92834 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPGRQ92834 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RPGRQ92834 AC128688.1-201ENST00000487626 519 ntBASIC24.5■■□□□ 1.51
RPGRQ92834 WWOX-216ENST00000569818 525 ntBASIC24.5■■□□□ 1.51
RPGRQ92834 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
RPGRQ92834 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPGRQ92834 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPGRQ92834 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RPGRQ92834 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
RPGRQ92834 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPGRQ92834 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPGRQ92834 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
RPGRQ92834 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RPGRQ92834 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPGRQ92834 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPGRQ92834 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPGRQ92834 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPGRQ92834 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPGRQ92834 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPGRQ92834 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPGRQ92834 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.49■■□□□ 1.51
RPGRQ92834 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.49■■□□□ 1.51
RPGRQ92834 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC24.49■■□□□ 1.51
RPGRQ92834 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC24.49■■□□□ 1.51
RPGRQ92834 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms