Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 CROCCP5-201ENST00000436658 830 ntBASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 AC007952.6-201ENST00000573168 2673 ntBASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 AC003957.1-201ENST00000625108 2673 ntBASIC16.42■□□□□ 0.22
ZNF439Q8NDP4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 AF201337.1-201ENST00000520239 748 ntBASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 PCDHAC2-203ENST00000615316 3011 ntBASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
ZNF439Q8NDP4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 AL691432.2-201ENST00000607222 2038 ntBASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 C2orf69P4-201ENST00000565394 541 ntBASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 AC105036.2-201ENST00000569468 176 ntBASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 AL031963.3-201ENST00000606441 850 ntBASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF439Q8NDP4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
ZNF439Q8NDP4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ZNF439Q8NDP4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 KRT8P17-201ENST00000453110 1448 ntBASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms