Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 AC006970.2-201ENST00000450065 779 ntBASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 DUX4L16-201ENST00000555130 1264 ntBASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 AC013268.1-206ENST00000638368 961 ntBASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 AC112229.1-201ENST00000639295 961 ntBASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PNLDC1Q8NA58 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 TERF1P5-201ENST00000477545 1207 ntBASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 AC120498.9-201ENST00000339021 3867 ntBASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 TMEM179-206ENST00000616017 1645 ntBASIC17.29■□□□□ 0.36
PNLDC1Q8NA58 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 RAP2CP1-201ENST00000605103 478 ntBASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PNLDC1Q8NA58 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PNLDC1Q8NA58 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PNLDC1Q8NA58 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PNLDC1Q8NA58 BX119927.1-201ENST00000636596 1552 ntBASIC17.27■□□□□ 0.35
PNLDC1Q8NA58 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PNLDC1Q8NA58 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.27■□□□□ 0.35
PNLDC1Q8NA58 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PNLDC1Q8NA58 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms