Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
VPS8Q8N3P4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
VPS8Q8N3P4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC31.15■■■□□ 2.58
VPS8Q8N3P4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
VPS8Q8N3P4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
VPS8Q8N3P4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
VPS8Q8N3P4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
VPS8Q8N3P4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
VPS8Q8N3P4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
VPS8Q8N3P4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
VPS8Q8N3P4 AL391422.3-201ENST00000603791 2761 ntBASIC31.14■■■□□ 2.58
VPS8Q8N3P4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC31.14■■■□□ 2.58
VPS8Q8N3P4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
VPS8Q8N3P4 LINC01521-201ENST00000504184 1943 ntBASIC31.14■■■□□ 2.58
VPS8Q8N3P4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
VPS8Q8N3P4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
VPS8Q8N3P4 MIR718-201ENST00000390190 70 ntBASIC31.14■■■□□ 2.58
VPS8Q8N3P4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC31.14■■■□□ 2.58
VPS8Q8N3P4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC31.14■■■□□ 2.58
VPS8Q8N3P4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC31.14■■■□□ 2.58
VPS8Q8N3P4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC31.14■■■□□ 2.58
VPS8Q8N3P4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC31.14■■■□□ 2.58
VPS8Q8N3P4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.57
VPS8Q8N3P4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 GOLGA6L3-201ENST00000507199 1679 ntBASIC31.13■■■□□ 2.57
VPS8Q8N3P4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 AL353708.3-201ENST00000610272 989 ntBASIC31.13■■■□□ 2.57
VPS8Q8N3P4 AL049637.2-201ENST00000641778 930 ntBASIC31.13■■■□□ 2.57
VPS8Q8N3P4 GOLGA2P11-201ENST00000562660 1621 ntBASIC31.13■■■□□ 2.57
VPS8Q8N3P4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
VPS8Q8N3P4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
VPS8Q8N3P4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 HTR7P1-201ENST00000538670 1336 ntBASIC31.11■■■□□ 2.57
VPS8Q8N3P4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
VPS8Q8N3P4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 AL135905.2-201ENST00000584934 1404 ntBASIC31.1■■■□□ 2.57
VPS8Q8N3P4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
VPS8Q8N3P4 AC009237.14-201ENST00000609975 1594 ntBASIC31.09■■■□□ 2.57
VPS8Q8N3P4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms