Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 AC023632.3-201ENST00000521633 145 ntBASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 AC092118.2-201ENST00000613495 667 ntBASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE9Q8IYJ1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 AC090192.1-201ENST00000517740 490 ntBASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 TMEM179-206ENST00000616017 1645 ntBASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.61■□□□□ 0.73
CPNE9Q8IYJ1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE9Q8IYJ1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 AC091874.3-201ENST00000512672 1195 ntBASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE9Q8IYJ1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE9Q8IYJ1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE9Q8IYJ1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
CPNE9Q8IYJ1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE9Q8IYJ1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.58■□□□□ 0.72
CPNE9Q8IYJ1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.58■□□□□ 0.72
CPNE9Q8IYJ1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE9Q8IYJ1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms