Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 SLC29A4P1-201ENST00000398760 971 ntBASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 AC098934.4-201ENST00000564127 592 ntBASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 MIR4758-201ENST00000577688 71 ntBASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 AL109923.1-201ENST00000618799 583 ntBASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.8■□□□□ 0.44
NHLRC1Q6VVB1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NHLRC1Q6VVB1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 AC125437.2-201ENST00000625180 2167 ntBASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NHLRC1Q6VVB1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms