Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KRT40Q6A162 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KRT40Q6A162 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
KRT40Q6A162 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.98■■□□□ 1.27
KRT40Q6A162 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.98■■□□□ 1.27
KRT40Q6A162 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.98■■□□□ 1.27
KRT40Q6A162 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
KRT40Q6A162 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.98■■□□□ 1.27
KRT40Q6A162 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KRT40Q6A162 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.98■■□□□ 1.27
KRT40Q6A162 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.98■■□□□ 1.27
KRT40Q6A162 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
KRT40Q6A162 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRT40Q6A162 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRT40Q6A162 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
KRT40Q6A162 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
KRT40Q6A162 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.97■■□□□ 1.27
KRT40Q6A162 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRT40Q6A162 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRT40Q6A162 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.97■■□□□ 1.27
KRT40Q6A162 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.97■■□□□ 1.27
KRT40Q6A162 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRT40Q6A162 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
KRT40Q6A162 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRT40Q6A162 AC128676.1-201ENST00000454392 318 ntBASIC22.97■■□□□ 1.27
KRT40Q6A162 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.97■■□□□ 1.27
KRT40Q6A162 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.97■■□□□ 1.27
KRT40Q6A162 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.97■■□□□ 1.27
KRT40Q6A162 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.97■■□□□ 1.27
KRT40Q6A162 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
KRT40Q6A162 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.97■■□□□ 1.27
KRT40Q6A162 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.97■■□□□ 1.27
KRT40Q6A162 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRT40Q6A162 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
KRT40Q6A162 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.97■■□□□ 1.27
KRT40Q6A162 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
KRT40Q6A162 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRT40Q6A162 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
KRT40Q6A162 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
KRT40Q6A162 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.96■■□□□ 1.27
KRT40Q6A162 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
KRT40Q6A162 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.96■■□□□ 1.27
KRT40Q6A162 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.96■■□□□ 1.27
KRT40Q6A162 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.96■■□□□ 1.27
KRT40Q6A162 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.96■■□□□ 1.27
KRT40Q6A162 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
KRT40Q6A162 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.96■■□□□ 1.27
KRT40Q6A162 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.96■■□□□ 1.27
KRT40Q6A162 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
KRT40Q6A162 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.96■■□□□ 1.27
KRT40Q6A162 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRT40Q6A162 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.96■■□□□ 1.27
KRT40Q6A162 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
KRT40Q6A162 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.95■■□□□ 1.26
KRT40Q6A162 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
KRT40Q6A162 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
KRT40Q6A162 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
KRT40Q6A162 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
KRT40Q6A162 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.95■■□□□ 1.26
KRT40Q6A162 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.95■■□□□ 1.26
KRT40Q6A162 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
KRT40Q6A162 MYC-209ENST00000641252 345 ntBASIC22.95■■□□□ 1.26
KRT40Q6A162 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
KRT40Q6A162 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
KRT40Q6A162 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.95■■□□□ 1.26
KRT40Q6A162 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
KRT40Q6A162 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
KRT40Q6A162 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
KRT40Q6A162 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.94■■□□□ 1.26
KRT40Q6A162 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
KRT40Q6A162 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
KRT40Q6A162 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.94■■□□□ 1.26
KRT40Q6A162 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
KRT40Q6A162 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
KRT40Q6A162 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.94■■□□□ 1.26
KRT40Q6A162 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
KRT40Q6A162 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.94■■□□□ 1.26
KRT40Q6A162 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.94■■□□□ 1.26
KRT40Q6A162 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
KRT40Q6A162 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.94■■□□□ 1.26
KRT40Q6A162 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.94■■□□□ 1.26
KRT40Q6A162 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
KRT40Q6A162 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.94■■□□□ 1.26
KRT40Q6A162 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.94■■□□□ 1.26
KRT40Q6A162 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.94■■□□□ 1.26
KRT40Q6A162 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.93■■□□□ 1.26
KRT40Q6A162 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
KRT40Q6A162 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.93■■□□□ 1.26
KRT40Q6A162 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms