Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARS2Q5ST30 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARS2Q5ST30 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARS2Q5ST30 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.07■□□□□ 0.96
VARS2Q5ST30 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VARS2Q5ST30 AC018553.1-201ENST00000616682 1458 ntBASIC21.07■□□□□ 0.96
VARS2Q5ST30 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VARS2Q5ST30 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 TFP1-202ENST00000475455 1573 ntBASIC21.06■□□□□ 0.96
VARS2Q5ST30 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARS2Q5ST30 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARS2Q5ST30 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARS2Q5ST30 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VARS2Q5ST30 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARS2Q5ST30 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARS2Q5ST30 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VARS2Q5ST30 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
VARS2Q5ST30 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARS2Q5ST30 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VARS2Q5ST30 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VARS2Q5ST30 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.05■□□□□ 0.96
VARS2Q5ST30 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.05■□□□□ 0.96
VARS2Q5ST30 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.05■□□□□ 0.96
VARS2Q5ST30 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VARS2Q5ST30 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.05■□□□□ 0.96
VARS2Q5ST30 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VARS2Q5ST30 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
VARS2Q5ST30 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.05■□□□□ 0.96
VARS2Q5ST30 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VARS2Q5ST30 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
VARS2Q5ST30 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VARS2Q5ST30 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
VARS2Q5ST30 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
VARS2Q5ST30 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.04■□□□□ 0.96
VARS2Q5ST30 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARS2Q5ST30 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.04■□□□□ 0.96
VARS2Q5ST30 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARS2Q5ST30 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARS2Q5ST30 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARS2Q5ST30 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VARS2Q5ST30 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARS2Q5ST30 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VARS2Q5ST30 AC087499.1-201ENST00000418141 1075 ntBASIC21.04■□□□□ 0.96
VARS2Q5ST30 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.04■□□□□ 0.96
VARS2Q5ST30 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.04■□□□□ 0.96
VARS2Q5ST30 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.04■□□□□ 0.96
VARS2Q5ST30 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
VARS2Q5ST30 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.04■□□□□ 0.96
VARS2Q5ST30 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VARS2Q5ST30 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VARS2Q5ST30 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VARS2Q5ST30 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARS2Q5ST30 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VARS2Q5ST30 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VARS2Q5ST30 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VARS2Q5ST30 NIFKP9-201ENST00000419265 221 ntBASIC21.03■□□□□ 0.96
VARS2Q5ST30 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.03■□□□□ 0.96
VARS2Q5ST30 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VARS2Q5ST30 NUDT16P1-203ENST00000513809 620 ntBASIC21.03■□□□□ 0.96
VARS2Q5ST30 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.03■□□□□ 0.96
VARS2Q5ST30 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VARS2Q5ST30 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VARS2Q5ST30 PHGDH-210ENST00000641115 1638 ntBASIC21.03■□□□□ 0.96
VARS2Q5ST30 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.03■□□□□ 0.96
VARS2Q5ST30 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VARS2Q5ST30 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VARS2Q5ST30 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VARS2Q5ST30 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VARS2Q5ST30 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VARS2Q5ST30 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VARS2Q5ST30 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VARS2Q5ST30 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VARS2Q5ST30 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VARS2Q5ST30 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.02■□□□□ 0.96
VARS2Q5ST30 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
VARS2Q5ST30 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.95
VARS2Q5ST30 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VARS2Q5ST30 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms