Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.11■□□□□ 0.65
HMGCS1Q01581 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 AC009237.14-201ENST00000609975 1594 ntBASIC19.1■□□□□ 0.65
HMGCS1Q01581 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGCS1Q01581 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 AL512625.2-201ENST00000417533 625 ntBASIC19.1■□□□□ 0.65
HMGCS1Q01581 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
HMGCS1Q01581 AC073111.5-205ENST00000641717 521 ntBASIC19.1■□□□□ 0.65
HMGCS1Q01581 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HMGCS1Q01581 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGCS1Q01581 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS1Q01581 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS1Q01581 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGCS1Q01581 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS1Q01581 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HMGCS1Q01581 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
HMGCS1Q01581 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS1Q01581 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS1Q01581 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.08■□□□□ 0.65
HMGCS1Q01581 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS1Q01581 HLA-G-202ENST00000376815 851 ntBASIC19.08■□□□□ 0.64
HMGCS1Q01581 HLA-G-203ENST00000376818 1127 ntBASIC19.08■□□□□ 0.64
HMGCS1Q01581 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 CDCA4P2-201ENST00000441182 718 ntBASIC19.08■□□□□ 0.64
HMGCS1Q01581 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS1Q01581 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS1Q01581 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS1Q01581 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS1Q01581 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS1Q01581 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS1Q01581 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS1Q01581 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS1Q01581 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS1Q01581 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
HMGCS1Q01581 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
HMGCS1Q01581 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCS1Q01581 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.07■□□□□ 0.64
HMGCS1Q01581 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCS1Q01581 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCS1Q01581 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCS1Q01581 AL050303.2-201ENST00000619798 666 ntBASIC19.07■□□□□ 0.64
HMGCS1Q01581 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 AC093484.2-201ENST00000580996 2166 ntBASIC19.07■□□□□ 0.64
HMGCS1Q01581 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCS1Q01581 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
HMGCS1Q01581 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms