Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.97■□□□□ 0.15
CX3CL1P78423 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CL1P78423 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.96■□□□□ 0.15
CX3CL1P78423 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CL1P78423 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CL1P78423 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CL1P78423 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CX3CL1P78423 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CX3CL1P78423 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CL1P78423 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.96■□□□□ 0.15
CX3CL1P78423 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CX3CL1P78423 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
CX3CL1P78423 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CX3CL1P78423 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.96■□□□□ 0.15
CX3CL1P78423 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.96■□□□□ 0.15
CX3CL1P78423 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.96■□□□□ 0.15
CX3CL1P78423 AC104771.1-201ENST00000603335 964 ntBASIC15.96■□□□□ 0.15
CX3CL1P78423 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CX3CL1P78423 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CL1P78423 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CL1P78423 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CL1P78423 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CL1P78423 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.96■□□□□ 0.15
CX3CL1P78423 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CX3CL1P78423 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CX3CL1P78423 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CX3CL1P78423 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CX3CL1P78423 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.95■□□□□ 0.14
CX3CL1P78423 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.95■□□□□ 0.14
CX3CL1P78423 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.95■□□□□ 0.14
CX3CL1P78423 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.95■□□□□ 0.14
CX3CL1P78423 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CX3CL1P78423 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.95■□□□□ 0.14
CX3CL1P78423 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.95■□□□□ 0.14
CX3CL1P78423 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.95■□□□□ 0.14
CX3CL1P78423 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.95■□□□□ 0.14
CX3CL1P78423 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CX3CL1P78423 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.95■□□□□ 0.14
CX3CL1P78423 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.95■□□□□ 0.14
CX3CL1P78423 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.95■□□□□ 0.14
CX3CL1P78423 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.95■□□□□ 0.14
CX3CL1P78423 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CX3CL1P78423 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CX3CL1P78423 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CX3CL1P78423 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CX3CL1P78423 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.94■□□□□ 0.14
CX3CL1P78423 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.94■□□□□ 0.14
CX3CL1P78423 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.94■□□□□ 0.14
CX3CL1P78423 DUSP5P2-201ENST00000426873 1033 ntBASIC15.94■□□□□ 0.14
CX3CL1P78423 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CX3CL1P78423 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.94■□□□□ 0.14
CX3CL1P78423 AL138781.1-201ENST00000566567 1274 ntBASIC15.94■□□□□ 0.14
CX3CL1P78423 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.94■□□□□ 0.14
CX3CL1P78423 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CX3CL1P78423 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CX3CL1P78423 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.94■□□□□ 0.14
CX3CL1P78423 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CX3CL1P78423 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.94■□□□□ 0.14
CX3CL1P78423 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
CX3CL1P78423 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CX3CL1P78423 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CX3CL1P78423 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.94■□□□□ 0.14
CX3CL1P78423 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
CX3CL1P78423 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CL1P78423 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.93■□□□□ 0.14
CX3CL1P78423 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CL1P78423 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.93■□□□□ 0.14
CX3CL1P78423 HLA-L-209ENST00000420110 1011 ntBASIC15.93■□□□□ 0.14
CX3CL1P78423 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CL1P78423 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.93■□□□□ 0.14
CX3CL1P78423 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.93■□□□□ 0.14
CX3CL1P78423 AC091874.3-201ENST00000512672 1195 ntBASIC15.93■□□□□ 0.14
CX3CL1P78423 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.93■□□□□ 0.14
CX3CL1P78423 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms