Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
SLC1A1P43005 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLC1A1P43005 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC1A1P43005 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLC1A1P43005 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC1A1P43005 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A1P43005 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A1P43005 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A1P43005 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A1P43005 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC1A1P43005 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A1P43005 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.77■□□□□ 0.92
SLC1A1P43005 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.77■□□□□ 0.92
SLC1A1P43005 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.77■□□□□ 0.92
SLC1A1P43005 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC1A1P43005 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A1P43005 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC1A1P43005 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A1P43005 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC1A1P43005 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SLC1A1P43005 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.77■□□□□ 0.91
SLC1A1P43005 BX323043.1-201ENST00000641006 1765 ntBASIC20.77■□□□□ 0.91
SLC1A1P43005 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC1A1P43005 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC1A1P43005 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A1P43005 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A1P43005 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC1A1P43005 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC1A1P43005 AC004911.1-201ENST00000416316 871 ntBASIC20.76■□□□□ 0.91
SLC1A1P43005 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC1A1P43005 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC1A1P43005 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC1A1P43005 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A1P43005 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC1A1P43005 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC1A1P43005 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A1P43005 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A1P43005 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A1P43005 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC1A1P43005 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC1A1P43005 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SLC1A1P43005 LSM12P1-201ENST00000411836 588 ntBASIC20.75■□□□□ 0.91
SLC1A1P43005 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC1A1P43005 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.75■□□□□ 0.91
SLC1A1P43005 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A1P43005 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC1A1P43005 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A1P43005 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A1P43005 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A1P43005 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC1A1P43005 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A1P43005 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A1P43005 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC1A1P43005 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC1A1P43005 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A1P43005 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.74■□□□□ 0.91
SLC1A1P43005 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC1A1P43005 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC1A1P43005 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A1P43005 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A1P43005 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SLC1A1P43005 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC1A1P43005 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC1A1P43005 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC1A1P43005 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A1P43005 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SLC1A1P43005 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A1P43005 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A1P43005 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC1A1P43005 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC1A1P43005 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A1P43005 AC080038.1-201ENST00000611274 1154 ntBASIC20.73■□□□□ 0.91
SLC1A1P43005 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SLC1A1P43005 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A1P43005 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms