Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.06■□□□□ 0.8
HADHAP40939 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.06■□□□□ 0.8
HADHAP40939 HLA-G-202ENST00000376815 851 ntBASIC20.06■□□□□ 0.8
HADHAP40939 HLA-G-203ENST00000376818 1127 ntBASIC20.06■□□□□ 0.8
HADHAP40939 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HADHAP40939 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.06■□□□□ 0.8
HADHAP40939 KRT8P20-201ENST00000423953 1409 ntBASIC20.06■□□□□ 0.8
HADHAP40939 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HADHAP40939 DUSP5P2-201ENST00000426873 1033 ntBASIC20.06■□□□□ 0.8
HADHAP40939 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HADHAP40939 AC023632.3-201ENST00000521633 145 ntBASIC20.06■□□□□ 0.8
HADHAP40939 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
HADHAP40939 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.06■□□□□ 0.8
HADHAP40939 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HADHAP40939 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HADHAP40939 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.06■□□□□ 0.8
HADHAP40939 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HADHAP40939 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.06■□□□□ 0.8
HADHAP40939 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HADHAP40939 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HADHAP40939 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.06■□□□□ 0.8
HADHAP40939 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.05■□□□□ 0.8
HADHAP40939 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HADHAP40939 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HADHAP40939 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HADHAP40939 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HADHAP40939 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HADHAP40939 KRT8P17-201ENST00000453110 1448 ntBASIC20.05■□□□□ 0.8
HADHAP40939 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HADHAP40939 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HADHAP40939 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.05■□□□□ 0.8
HADHAP40939 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.05■□□□□ 0.8
HADHAP40939 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.05■□□□□ 0.8
HADHAP40939 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.05■□□□□ 0.8
HADHAP40939 AC091874.3-201ENST00000512672 1195 ntBASIC20.05■□□□□ 0.8
HADHAP40939 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.05■□□□□ 0.8
HADHAP40939 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.05■□□□□ 0.8
HADHAP40939 AC104771.1-201ENST00000603335 964 ntBASIC20.05■□□□□ 0.8
HADHAP40939 AL031963.3-201ENST00000606441 850 ntBASIC20.05■□□□□ 0.8
HADHAP40939 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HADHAP40939 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
HADHAP40939 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HADHAP40939 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HADHAP40939 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.05■□□□□ 0.8
HADHAP40939 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.05■□□□□ 0.8
HADHAP40939 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HADHAP40939 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.04■□□□□ 0.8
HADHAP40939 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HADHAP40939 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.04■□□□□ 0.8
HADHAP40939 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HADHAP40939 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HADHAP40939 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HADHAP40939 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HADHAP40939 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HADHAP40939 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.04■□□□□ 0.8
HADHAP40939 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HADHAP40939 AC073210.2-201ENST00000430369 194 ntBASIC20.04■□□□□ 0.8
HADHAP40939 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.04■□□□□ 0.8
HADHAP40939 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HADHAP40939 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.04■□□□□ 0.8
HADHAP40939 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.04■□□□□ 0.8
HADHAP40939 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.04■□□□□ 0.8
HADHAP40939 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
HADHAP40939 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HADHAP40939 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HADHAP40939 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HADHAP40939 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HADHAP40939 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.03■□□□□ 0.8
HADHAP40939 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
HADHAP40939 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HADHAP40939 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HADHAP40939 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.03■□□□□ 0.8
HADHAP40939 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HADHAP40939 AC097658.1-201ENST00000475555 843 ntBASIC20.03■□□□□ 0.8
HADHAP40939 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.03■□□□□ 0.8
HADHAP40939 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.03■□□□□ 0.8
HADHAP40939 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HADHAP40939 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HADHAP40939 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
HADHAP40939 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HADHAP40939 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HADHAP40939 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HADHAP40939 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HADHAP40939 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HADHAP40939 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.02■□□□□ 0.8
HADHAP40939 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HADHAP40939 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms