Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MDH1P40925 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MDH1P40925 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.94■□□□□ 0.78
MDH1P40925 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.94■□□□□ 0.78
MDH1P40925 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.94■□□□□ 0.78
MDH1P40925 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.94■□□□□ 0.78
MDH1P40925 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MDH1P40925 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MDH1P40925 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MDH1P40925 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MDH1P40925 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MDH1P40925 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.93■□□□□ 0.78
MDH1P40925 FZD10-202ENST00000539839 3282 ntBASIC19.93■□□□□ 0.78
MDH1P40925 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.93■□□□□ 0.78
MDH1P40925 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.93■□□□□ 0.78
MDH1P40925 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MDH1P40925 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MDH1P40925 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.93■□□□□ 0.78
MDH1P40925 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.93■□□□□ 0.78
MDH1P40925 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
MDH1P40925 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.93■□□□□ 0.78
MDH1P40925 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.93■□□□□ 0.78
MDH1P40925 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
MDH1P40925 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MDH1P40925 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MDH1P40925 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MDH1P40925 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
MDH1P40925 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
MDH1P40925 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MDH1P40925 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MDH1P40925 AC090164.3-201ENST00000610780 2143 ntBASIC19.93■□□□□ 0.78
MDH1P40925 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
MDH1P40925 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.92■□□□□ 0.78
MDH1P40925 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
MDH1P40925 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MDH1P40925 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.92■□□□□ 0.78
MDH1P40925 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MDH1P40925 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.92■□□□□ 0.78
MDH1P40925 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.92■□□□□ 0.78
MDH1P40925 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
MDH1P40925 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MDH1P40925 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MDH1P40925 AL356740.2-201ENST00000601559 647 ntBASIC19.92■□□□□ 0.78
MDH1P40925 AC011298.3-201ENST00000615796 283 ntBASIC19.92■□□□□ 0.78
MDH1P40925 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.92■□□□□ 0.78
MDH1P40925 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 NOC2LP2-201ENST00000407594 1944 ntBASIC19.92■□□□□ 0.78
MDH1P40925 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MDH1P40925 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MDH1P40925 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MDH1P40925 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.91■□□□□ 0.78
MDH1P40925 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.91■□□□□ 0.78
MDH1P40925 AC245052.3-201ENST00000450182 901 ntBASIC19.91■□□□□ 0.78
MDH1P40925 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.91■□□□□ 0.78
MDH1P40925 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
MDH1P40925 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MDH1P40925 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
MDH1P40925 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.91■□□□□ 0.78
MDH1P40925 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MDH1P40925 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 AC006333.2-201ENST00000607957 2099 ntBASIC19.9■□□□□ 0.78
MDH1P40925 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.9■□□□□ 0.78
MDH1P40925 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MDH1P40925 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MDH1P40925 POU5F1P4-201ENST00000413175 1085 ntBASIC19.9■□□□□ 0.78
MDH1P40925 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MDH1P40925 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.9■□□□□ 0.78
MDH1P40925 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms