Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.91■□□□□ 0.94
RFC1P35251 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.91■□□□□ 0.94
RFC1P35251 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RFC1P35251 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.91■□□□□ 0.94
RFC1P35251 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFC1P35251 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC1P35251 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RFC1P35251 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC1P35251 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.9■□□□□ 0.94
RFC1P35251 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC1P35251 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.9■□□□□ 0.94
RFC1P35251 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RFC1P35251 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RFC1P35251 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.9■□□□□ 0.94
RFC1P35251 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.9■□□□□ 0.94
RFC1P35251 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC1P35251 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC1P35251 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC1P35251 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC1P35251 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC1P35251 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC1P35251 TMEM179-206ENST00000616017 1645 ntBASIC20.89■□□□□ 0.94
RFC1P35251 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFC1P35251 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RFC1P35251 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RFC1P35251 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.89■□□□□ 0.94
RFC1P35251 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.89■□□□□ 0.94
RFC1P35251 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFC1P35251 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC1P35251 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC1P35251 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RFC1P35251 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC1P35251 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
RFC1P35251 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFC1P35251 AC097658.1-201ENST00000475555 843 ntBASIC20.89■□□□□ 0.93
RFC1P35251 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.89■□□□□ 0.93
RFC1P35251 AC142086.2-201ENST00000569753 217 ntBASIC20.89■□□□□ 0.93
RFC1P35251 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
RFC1P35251 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC1P35251 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC1P35251 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.89■□□□□ 0.93
RFC1P35251 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFC1P35251 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RFC1P35251 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC1P35251 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.89■□□□□ 0.93
RFC1P35251 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC1P35251 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFC1P35251 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.88■□□□□ 0.93
RFC1P35251 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC1P35251 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC1P35251 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC1P35251 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC1P35251 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC1P35251 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC1P35251 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC1P35251 HLA-L-209ENST00000420110 1011 ntBASIC20.88■□□□□ 0.93
RFC1P35251 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.88■□□□□ 0.93
RFC1P35251 AC073210.2-201ENST00000430369 194 ntBASIC20.88■□□□□ 0.93
RFC1P35251 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.88■□□□□ 0.93
RFC1P35251 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC1P35251 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC1P35251 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.88■□□□□ 0.93
RFC1P35251 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
RFC1P35251 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC1P35251 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC1P35251 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.87■□□□□ 0.93
RFC1P35251 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC1P35251 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC1P35251 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RFC1P35251 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC1P35251 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC1P35251 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.87■□□□□ 0.93
RFC1P35251 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.87■□□□□ 0.93
RFC1P35251 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFC1P35251 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.87■□□□□ 0.93
RFC1P35251 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.87■□□□□ 0.93
RFC1P35251 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.87■□□□□ 0.93
RFC1P35251 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RFC1P35251 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.87■□□□□ 0.93
RFC1P35251 AC083880.1-201ENST00000608266 535 ntBASIC20.87■□□□□ 0.93
RFC1P35251 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC1P35251 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.87■□□□□ 0.93
RFC1P35251 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC1P35251 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.87■□□□□ 0.93
RFC1P35251 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RFC1P35251 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC1P35251 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC1P35251 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFC1P35251 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.86■□□□□ 0.93
RFC1P35251 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.86■□□□□ 0.93
RFC1P35251 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFC1P35251 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RFC1P35251 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.86■□□□□ 0.93
RFC1P35251 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.86■□□□□ 0.93
RFC1P35251 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC1P35251 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RFC1P35251 AC069152.1-201ENST00000438030 544 ntBASIC20.86■□□□□ 0.93
RFC1P35251 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.86■□□□□ 0.93
RFC1P35251 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.86■□□□□ 0.93
RFC1P35251 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms