Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MSR1P21757 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.53■□□□□ 0.4
MSR1P21757 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.53■□□□□ 0.4
MSR1P21757 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MSR1P21757 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.53■□□□□ 0.4
MSR1P21757 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MSR1P21757 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.53■□□□□ 0.4
MSR1P21757 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MSR1P21757 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MSR1P21757 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.53■□□□□ 0.4
MSR1P21757 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MSR1P21757 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.53■□□□□ 0.4
MSR1P21757 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.53■□□□□ 0.4
MSR1P21757 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.53■□□□□ 0.4
MSR1P21757 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.53■□□□□ 0.4
MSR1P21757 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.53■□□□□ 0.4
MSR1P21757 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.53■□□□□ 0.4
MSR1P21757 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MSR1P21757 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MSR1P21757 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MSR1P21757 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MSR1P21757 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
MSR1P21757 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MSR1P21757 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MSR1P21757 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MSR1P21757 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MSR1P21757 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.52■□□□□ 0.4
MSR1P21757 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.52■□□□□ 0.4
MSR1P21757 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.52■□□□□ 0.4
MSR1P21757 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.52■□□□□ 0.4
MSR1P21757 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MSR1P21757 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
MSR1P21757 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.52■□□□□ 0.4
MSR1P21757 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MSR1P21757 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MSR1P21757 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
MSR1P21757 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.39
MSR1P21757 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MSR1P21757 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MSR1P21757 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.52■□□□□ 0.39
MSR1P21757 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MSR1P21757 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MSR1P21757 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSR1P21757 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MSR1P21757 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MSR1P21757 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MSR1P21757 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.51■□□□□ 0.39
MSR1P21757 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
MSR1P21757 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.51■□□□□ 0.39
MSR1P21757 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSR1P21757 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.51■□□□□ 0.39
MSR1P21757 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MSR1P21757 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSR1P21757 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MSR1P21757 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MSR1P21757 AC091874.3-201ENST00000512672 1195 ntBASIC17.51■□□□□ 0.39
MSR1P21757 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
MSR1P21757 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.51■□□□□ 0.39
MSR1P21757 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.51■□□□□ 0.39
MSR1P21757 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.51■□□□□ 0.39
MSR1P21757 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.51■□□□□ 0.39
MSR1P21757 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MSR1P21757 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSR1P21757 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MSR1P21757 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MSR1P21757 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.51■□□□□ 0.39
MSR1P21757 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MSR1P21757 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSR1P21757 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MSR1P21757 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MSR1P21757 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.5■□□□□ 0.39
MSR1P21757 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.5■□□□□ 0.39
MSR1P21757 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MSR1P21757 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MSR1P21757 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
MSR1P21757 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.5■□□□□ 0.39
MSR1P21757 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.5■□□□□ 0.39
MSR1P21757 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.5■□□□□ 0.39
MSR1P21757 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.5■□□□□ 0.39
MSR1P21757 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.5■□□□□ 0.39
MSR1P21757 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
MSR1P21757 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.5■□□□□ 0.39
MSR1P21757 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MSR1P21757 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MSR1P21757 AC009237.14-201ENST00000609975 1594 ntBASIC17.49■□□□□ 0.39
MSR1P21757 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.49■□□□□ 0.39
MSR1P21757 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.49■□□□□ 0.39
MSR1P21757 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms