Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN1P07384 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN1P07384 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CAPN1P07384 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN1P07384 LSM12P1-201ENST00000411836 588 ntBASIC19.5■□□□□ 0.71
CAPN1P07384 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CAPN1P07384 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN1P07384 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.5■□□□□ 0.71
CAPN1P07384 AC066615.1-201ENST00000640911 628 ntBASIC19.5■□□□□ 0.71
CAPN1P07384 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.5■□□□□ 0.71
CAPN1P07384 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.5■□□□□ 0.71
CAPN1P07384 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN1P07384 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN1P07384 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CAPN1P07384 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.5■□□□□ 0.71
CAPN1P07384 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.5■□□□□ 0.71
CAPN1P07384 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN1P07384 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN1P07384 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN1P07384 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.5■□□□□ 0.71
CAPN1P07384 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN1P07384 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CAPN1P07384 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CAPN1P07384 AL691432.2-201ENST00000607222 2038 ntBASIC19.49■□□□□ 0.71
CAPN1P07384 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CAPN1P07384 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CAPN1P07384 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.49■□□□□ 0.71
CAPN1P07384 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.49■□□□□ 0.71
CAPN1P07384 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.49■□□□□ 0.71
CAPN1P07384 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.49■□□□□ 0.71
CAPN1P07384 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 AC008687.6-201ENST00000596318 630 ntBASIC19.49■□□□□ 0.71
CAPN1P07384 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.49■□□□□ 0.71
CAPN1P07384 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN1P07384 BX119927.1-201ENST00000636596 1552 ntBASIC19.49■□□□□ 0.71
CAPN1P07384 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN1P07384 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CAPN1P07384 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CAPN1P07384 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN1P07384 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CAPN1P07384 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN1P07384 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN1P07384 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN1P07384 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN1P07384 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN1P07384 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.48■□□□□ 0.71
CAPN1P07384 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.48■□□□□ 0.71
CAPN1P07384 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN1P07384 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.48■□□□□ 0.71
CAPN1P07384 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CAPN1P07384 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.48■□□□□ 0.71
CAPN1P07384 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN1P07384 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CAPN1P07384 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CAPN1P07384 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN1P07384 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.48■□□□□ 0.71
CAPN1P07384 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CAPN1P07384 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CAPN1P07384 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.47■□□□□ 0.71
CAPN1P07384 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.47■□□□□ 0.71
CAPN1P07384 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CAPN1P07384 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.47■□□□□ 0.71
CAPN1P07384 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 PRORSD1P-201ENST00000295112 541 ntBASIC19.47■□□□□ 0.71
CAPN1P07384 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 MCRIP2P1-201ENST00000394346 511 ntBASIC19.47■□□□□ 0.71
CAPN1P07384 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CAPN1P07384 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.47■□□□□ 0.71
CAPN1P07384 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.47■□□□□ 0.71
CAPN1P07384 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.47■□□□□ 0.71
CAPN1P07384 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CAPN1P07384 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CAPN1P07384 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.47■□□□□ 0.71
CAPN1P07384 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.47■□□□□ 0.71
CAPN1P07384 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.47■□□□□ 0.71
CAPN1P07384 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.47■□□□□ 0.71
CAPN1P07384 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 AC125437.2-201ENST00000625180 2167 ntBASIC19.47■□□□□ 0.71
CAPN1P07384 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.47■□□□□ 0.71
CAPN1P07384 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms