Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.27■□□□□ 0.84
USP12O75317 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.27■□□□□ 0.84
USP12O75317 C2orf69P4-201ENST00000565394 541 ntBASIC20.27■□□□□ 0.84
USP12O75317 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP12O75317 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP12O75317 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP12O75317 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP12O75317 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP12O75317 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP12O75317 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP12O75317 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.27■□□□□ 0.83
USP12O75317 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP12O75317 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.26■□□□□ 0.83
USP12O75317 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP12O75317 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP12O75317 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP12O75317 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP12O75317 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USP12O75317 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.26■□□□□ 0.83
USP12O75317 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.26■□□□□ 0.83
USP12O75317 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP12O75317 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.26■□□□□ 0.83
USP12O75317 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP12O75317 KRT8P17-201ENST00000453110 1448 ntBASIC20.26■□□□□ 0.83
USP12O75317 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
USP12O75317 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
USP12O75317 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USP12O75317 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP12O75317 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
USP12O75317 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP12O75317 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.25■□□□□ 0.83
USP12O75317 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP12O75317 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
USP12O75317 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
USP12O75317 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP12O75317 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP12O75317 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.25■□□□□ 0.83
USP12O75317 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
USP12O75317 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.25■□□□□ 0.83
USP12O75317 MYC-209ENST00000641252 345 ntBASIC20.25■□□□□ 0.83
USP12O75317 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP12O75317 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
USP12O75317 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP12O75317 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP12O75317 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP12O75317 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP12O75317 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP12O75317 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP12O75317 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP12O75317 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP12O75317 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP12O75317 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.24■□□□□ 0.83
USP12O75317 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP12O75317 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP12O75317 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.24■□□□□ 0.83
USP12O75317 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP12O75317 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
USP12O75317 AL158211.5-201ENST00000623583 2518 ntBASIC20.24■□□□□ 0.83
USP12O75317 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
USP12O75317 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.24■□□□□ 0.83
USP12O75317 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
USP12O75317 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.23■□□□□ 0.83
USP12O75317 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP12O75317 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USP12O75317 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP12O75317 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP12O75317 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP12O75317 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP12O75317 GCSHP5-201ENST00000443090 522 ntBASIC20.23■□□□□ 0.83
USP12O75317 AL158047.1-201ENST00000445918 881 ntBASIC20.23■□□□□ 0.83
USP12O75317 AC006058.3-201ENST00000606217 1069 ntBASIC20.23■□□□□ 0.83
USP12O75317 AL031963.3-201ENST00000606441 850 ntBASIC20.23■□□□□ 0.83
USP12O75317 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP12O75317 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP12O75317 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP12O75317 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP12O75317 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP12O75317 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP12O75317 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP12O75317 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP12O75317 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP12O75317 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP12O75317 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.22■□□□□ 0.83
USP12O75317 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.22■□□□□ 0.83
USP12O75317 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.22■□□□□ 0.83
USP12O75317 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
USP12O75317 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.22■□□□□ 0.83
USP12O75317 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.22■□□□□ 0.83
USP12O75317 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP12O75317 AC091874.3-201ENST00000512672 1195 ntBASIC20.22■□□□□ 0.83
USP12O75317 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.22■□□□□ 0.83
USP12O75317 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.22■□□□□ 0.83
USP12O75317 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
USP12O75317 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
USP12O75317 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP12O75317 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP12O75317 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.22■□□□□ 0.83
USP12O75317 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.22■□□□□ 0.83
USP12O75317 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
USP12O75317 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms