Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.56■■□□□ 1.68
PTCD1O75127 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
PTCD1O75127 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD1O75127 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD1O75127 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.55■■□□□ 1.68
PTCD1O75127 AC026310.3-201ENST00000625186 2373 ntBASIC25.55■■□□□ 1.68
PTCD1O75127 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
PTCD1O75127 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD1O75127 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD1O75127 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.55■■□□□ 1.68
PTCD1O75127 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD1O75127 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.55■■□□□ 1.68
PTCD1O75127 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC25.55■■□□□ 1.68
PTCD1O75127 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD1O75127 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD1O75127 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD1O75127 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD1O75127 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
PTCD1O75127 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD1O75127 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC25.55■■□□□ 1.68
PTCD1O75127 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD1O75127 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD1O75127 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PTCD1O75127 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.54■■□□□ 1.68
PTCD1O75127 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
PTCD1O75127 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PTCD1O75127 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
PTCD1O75127 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.54■■□□□ 1.68
PTCD1O75127 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC25.54■■□□□ 1.68
PTCD1O75127 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.54■■□□□ 1.68
PTCD1O75127 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PTCD1O75127 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.54■■□□□ 1.68
PTCD1O75127 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD1O75127 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.53■■□□□ 1.68
PTCD1O75127 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD1O75127 AC116351.2-201ENST00000606540 1585 ntBASIC25.53■■□□□ 1.68
PTCD1O75127 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD1O75127 AC104076.2-201ENST00000448912 469 ntBASIC25.53■■□□□ 1.68
PTCD1O75127 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.53■■□□□ 1.68
PTCD1O75127 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD1O75127 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.53■■□□□ 1.68
PTCD1O75127 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
PTCD1O75127 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PTCD1O75127 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.53■■□□□ 1.68
PTCD1O75127 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD1O75127 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD1O75127 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.53■■□□□ 1.68
PTCD1O75127 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD1O75127 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.53■■□□□ 1.68
PTCD1O75127 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD1O75127 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.53■■□□□ 1.68
PTCD1O75127 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC25.52■■□□□ 1.68
PTCD1O75127 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
PTCD1O75127 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCD1O75127 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.52■■□□□ 1.68
PTCD1O75127 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
PTCD1O75127 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PTCD1O75127 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.52■■□□□ 1.68
PTCD1O75127 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PTCD1O75127 AC011506.1-201ENST00000474329 610 ntBASIC25.52■■□□□ 1.68
PTCD1O75127 AC010203.1-204ENST00000548782 407 ntBASIC25.52■■□□□ 1.68
PTCD1O75127 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.52■■□□□ 1.68
PTCD1O75127 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.52■■□□□ 1.68
PTCD1O75127 AL445675.2-201ENST00000620291 557 ntBASIC25.52■■□□□ 1.68
PTCD1O75127 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.52■■□□□ 1.68
PTCD1O75127 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC25.52■■□□□ 1.68
PTCD1O75127 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC25.52■■□□□ 1.68
PTCD1O75127 FSCN1P1-201ENST00000568912 1481 ntBASIC25.52■■□□□ 1.68
PTCD1O75127 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
PTCD1O75127 TFP1-202ENST00000475455 1573 ntBASIC25.52■■□□□ 1.68
PTCD1O75127 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCD1O75127 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.52■■□□□ 1.68
PTCD1O75127 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCD1O75127 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
PTCD1O75127 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.67
PTCD1O75127 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD1O75127 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PTCD1O75127 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD1O75127 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.51■■□□□ 1.67
PTCD1O75127 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC25.51■■□□□ 1.67
PTCD1O75127 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.51■■□□□ 1.67
PTCD1O75127 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD1O75127 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.51■■□□□ 1.67
PTCD1O75127 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC25.51■■□□□ 1.67
PTCD1O75127 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
PTCD1O75127 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD1O75127 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD1O75127 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
PTCD1O75127 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
PTCD1O75127 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD1O75127 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.51■■□□□ 1.67
PTCD1O75127 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD1O75127 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PTCD1O75127 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC25.5■■□□□ 1.67
PTCD1O75127 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
PTCD1O75127 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PTCD1O75127 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.5■■□□□ 1.67
PTCD1O75127 B3GAT3P1-201ENST00000471720 806 ntBASIC25.5■■□□□ 1.67
PTCD1O75127 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PTCD1O75127 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms