Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTNND1O60716 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CTNND1O60716 DPP3P2-201ENST00000416030 1696 ntBASIC23.26■■□□□ 1.31
CTNND1O60716 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTNND1O60716 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTNND1O60716 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTNND1O60716 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTNND1O60716 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.26■■□□□ 1.31
CTNND1O60716 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTNND1O60716 AL590326.2-201ENST00000625139 305 ntBASIC23.26■■□□□ 1.31
CTNND1O60716 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTNND1O60716 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTNND1O60716 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CTNND1O60716 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.26■■□□□ 1.31
CTNND1O60716 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTNND1O60716 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CTNND1O60716 FSCN1P1-201ENST00000568912 1481 ntBASIC23.25■■□□□ 1.31
CTNND1O60716 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CTNND1O60716 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.25■■□□□ 1.31
CTNND1O60716 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTNND1O60716 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTNND1O60716 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CTNND1O60716 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.25■■□□□ 1.31
CTNND1O60716 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CTNND1O60716 MESTP1-201ENST00000404287 994 ntBASIC23.25■■□□□ 1.31
CTNND1O60716 AC026271.3-201ENST00000571884 352 ntBASIC23.25■■□□□ 1.31
CTNND1O60716 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC23.25■■□□□ 1.31
CTNND1O60716 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CTNND1O60716 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.25■■□□□ 1.31
CTNND1O60716 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTNND1O60716 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.25■■□□□ 1.31
CTNND1O60716 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTNND1O60716 KRT16P6-202ENST00000425692 1426 ntBASIC23.25■■□□□ 1.31
CTNND1O60716 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTNND1O60716 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTNND1O60716 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTNND1O60716 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTNND1O60716 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.24■■□□□ 1.31
CTNND1O60716 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.24■■□□□ 1.31
CTNND1O60716 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.24■■□□□ 1.31
CTNND1O60716 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CTNND1O60716 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
CTNND1O60716 AC006128.1-201ENST00000624704 1661 ntBASIC23.24■■□□□ 1.31
CTNND1O60716 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTNND1O60716 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CTNND1O60716 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CTNND1O60716 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTNND1O60716 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTNND1O60716 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CTNND1O60716 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTNND1O60716 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.24■■□□□ 1.31
CTNND1O60716 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CTNND1O60716 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTNND1O60716 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CTNND1O60716 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CTNND1O60716 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTNND1O60716 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.23■■□□□ 1.31
CTNND1O60716 ARMC10P1-201ENST00000313754 855 ntBASIC23.23■■□□□ 1.31
CTNND1O60716 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.23■■□□□ 1.31
CTNND1O60716 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.23■■□□□ 1.31
CTNND1O60716 YBX1P10-201ENST00000444752 975 ntBASIC23.23■■□□□ 1.31
CTNND1O60716 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.23■■□□□ 1.31
CTNND1O60716 CBFB-203ENST00000561924 584 ntTSL 5 BASIC23.23■■□□□ 1.31
CTNND1O60716 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.23■■□□□ 1.31
CTNND1O60716 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CTNND1O60716 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CTNND1O60716 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTNND1O60716 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTNND1O60716 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTNND1O60716 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTNND1O60716 AC073508.3-201ENST00000619697 1419 ntBASIC23.23■■□□□ 1.31
CTNND1O60716 AF106564.1-201ENST00000607058 2553 ntBASIC23.23■■□□□ 1.31
CTNND1O60716 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CTNND1O60716 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.22■■□□□ 1.31
CTNND1O60716 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTNND1O60716 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.22■■□□□ 1.31
CTNND1O60716 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTNND1O60716 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTNND1O60716 TERF1P1-201ENST00000311003 1181 ntBASIC23.22■■□□□ 1.31
CTNND1O60716 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.22■■□□□ 1.31
CTNND1O60716 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.22■■□□□ 1.31
CTNND1O60716 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
CTNND1O60716 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTNND1O60716 KRT18P16-201ENST00000510337 1294 ntBASIC23.22■■□□□ 1.31
CTNND1O60716 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.22■■□□□ 1.31
CTNND1O60716 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.22■■□□□ 1.31
CTNND1O60716 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.22■■□□□ 1.31
CTNND1O60716 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTNND1O60716 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.22■■□□□ 1.31
CTNND1O60716 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTNND1O60716 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTNND1O60716 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTNND1O60716 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.21■■□□□ 1.31
CTNND1O60716 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTNND1O60716 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.21■■□□□ 1.31
CTNND1O60716 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.21■■□□□ 1.31
CTNND1O60716 AL137013.1-201ENST00000432946 1228 ntBASIC23.21■■□□□ 1.31
CTNND1O60716 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.21■■□□□ 1.31
CTNND1O60716 SLC25A3P1-201ENST00000443844 931 ntBASIC23.21■■□□□ 1.31
CTNND1O60716 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms