Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.47■□□□□ 0.87
TSPAN3O60637 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.47■□□□□ 0.87
TSPAN3O60637 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.47■□□□□ 0.87
TSPAN3O60637 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.47■□□□□ 0.87
TSPAN3O60637 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN3O60637 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN3O60637 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN3O60637 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.47■□□□□ 0.87
TSPAN3O60637 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN3O60637 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN3O60637 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
TSPAN3O60637 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TSPAN3O60637 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSPAN3O60637 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSPAN3O60637 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.46■□□□□ 0.87
TSPAN3O60637 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSPAN3O60637 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSPAN3O60637 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TSPAN3O60637 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TSPAN3O60637 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TSPAN3O60637 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.46■□□□□ 0.87
TSPAN3O60637 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.46■□□□□ 0.87
TSPAN3O60637 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.46■□□□□ 0.87
TSPAN3O60637 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.46■□□□□ 0.87
TSPAN3O60637 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.46■□□□□ 0.87
TSPAN3O60637 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.46■□□□□ 0.87
TSPAN3O60637 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSPAN3O60637 AL512408.1-201ENST00000569378 2000 ntBASIC20.46■□□□□ 0.87
TSPAN3O60637 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSPAN3O60637 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TSPAN3O60637 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.45■□□□□ 0.86
TSPAN3O60637 AP005212.1-201ENST00000581547 1997 ntBASIC20.45■□□□□ 0.86
TSPAN3O60637 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TSPAN3O60637 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.45■□□□□ 0.86
TSPAN3O60637 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.45■□□□□ 0.86
TSPAN3O60637 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TSPAN3O60637 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TSPAN3O60637 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.45■□□□□ 0.86
TSPAN3O60637 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.45■□□□□ 0.86
TSPAN3O60637 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.45■□□□□ 0.86
TSPAN3O60637 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.45■□□□□ 0.86
TSPAN3O60637 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.45■□□□□ 0.86
TSPAN3O60637 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TSPAN3O60637 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.45■□□□□ 0.86
TSPAN3O60637 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.45■□□□□ 0.86
TSPAN3O60637 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 AL391422.3-201ENST00000603791 2761 ntBASIC20.45■□□□□ 0.86
TSPAN3O60637 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSPAN3O60637 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN3O60637 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN3O60637 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN3O60637 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
TSPAN3O60637 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.44■□□□□ 0.86
TSPAN3O60637 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN3O60637 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
TSPAN3O60637 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.44■□□□□ 0.86
TSPAN3O60637 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
TSPAN3O60637 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN3O60637 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN3O60637 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TSPAN3O60637 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN3O60637 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.44■□□□□ 0.86
TSPAN3O60637 MIR718-201ENST00000390190 70 ntBASIC20.44■□□□□ 0.86
TSPAN3O60637 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.44■□□□□ 0.86
TSPAN3O60637 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.44■□□□□ 0.86
TSPAN3O60637 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TSPAN3O60637 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.44■□□□□ 0.86
TSPAN3O60637 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.44■□□□□ 0.86
TSPAN3O60637 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN3O60637 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.44■□□□□ 0.86
TSPAN3O60637 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN3O60637 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.44■□□□□ 0.86
TSPAN3O60637 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN3O60637 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSPAN3O60637 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.44■□□□□ 0.86
TSPAN3O60637 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.44■□□□□ 0.86
TSPAN3O60637 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.44■□□□□ 0.86
TSPAN3O60637 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN3O60637 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN3O60637 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN3O60637 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TSPAN3O60637 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TSPAN3O60637 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.43■□□□□ 0.86
TSPAN3O60637 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN3O60637 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TSPAN3O60637 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN3O60637 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN3O60637 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms