Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF13O43567 AL355472.2-201ENST00000422958 438 ntBASIC18.05■□□□□ 0.48
RNF13O43567 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF13O43567 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
RNF13O43567 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF13O43567 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF13O43567 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF13O43567 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF13O43567 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF13O43567 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF13O43567 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF13O43567 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF13O43567 AL158211.5-201ENST00000623583 2518 ntBASIC18.05■□□□□ 0.48
RNF13O43567 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF13O43567 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNF13O43567 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF13O43567 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF13O43567 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RNF13O43567 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF13O43567 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.04■□□□□ 0.48
RNF13O43567 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF13O43567 AC073111.5-205ENST00000641717 521 ntBASIC18.04■□□□□ 0.48
RNF13O43567 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF13O43567 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 AC010980.2-201ENST00000587099 1412 ntBASIC18.04■□□□□ 0.48
RNF13O43567 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RNF13O43567 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF13O43567 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF13O43567 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RNF13O43567 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF13O43567 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RNF13O43567 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF13O43567 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF13O43567 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF13O43567 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF13O43567 AL589743.5-201ENST00000616611 1050 ntBASIC18.03■□□□□ 0.48
RNF13O43567 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF13O43567 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF13O43567 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF13O43567 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF13O43567 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF13O43567 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF13O43567 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF13O43567 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF13O43567 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF13O43567 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.02■□□□□ 0.48
RNF13O43567 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF13O43567 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RNF13O43567 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF13O43567 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF13O43567 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RNF13O43567 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF13O43567 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RNF13O43567 AC093787.1-201ENST00000450396 207 ntBASIC18.02■□□□□ 0.48
RNF13O43567 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF13O43567 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF13O43567 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF13O43567 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF13O43567 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF13O43567 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF13O43567 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF13O43567 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
RNF13O43567 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF13O43567 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF13O43567 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
RNF13O43567 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RNF13O43567 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF13O43567 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF13O43567 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms