Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC3O15379 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC3O15379 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.31■□□□□ 0.68
HDAC3O15379 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC3O15379 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC3O15379 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.31■□□□□ 0.68
HDAC3O15379 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HDAC3O15379 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HDAC3O15379 KRT16P6-202ENST00000425692 1426 ntBASIC19.31■□□□□ 0.68
HDAC3O15379 AP001271.2-201ENST00000624018 1556 ntBASIC19.31■□□□□ 0.68
HDAC3O15379 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HDAC3O15379 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HDAC3O15379 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC3O15379 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC3O15379 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 AC120498.9-201ENST00000339021 3867 ntBASIC19.3■□□□□ 0.68
HDAC3O15379 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC3O15379 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 YBX1P1-201ENST00000445822 960 ntBASIC19.3■□□□□ 0.68
HDAC3O15379 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC3O15379 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC3O15379 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HDAC3O15379 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC3O15379 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC3O15379 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC3O15379 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC3O15379 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC3O15379 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC3O15379 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC3O15379 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC3O15379 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC3O15379 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC3O15379 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC3O15379 KRT18P14-201ENST00000534205 1250 ntBASIC19.29■□□□□ 0.68
HDAC3O15379 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HDAC3O15379 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
HDAC3O15379 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.29■□□□□ 0.68
HDAC3O15379 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.28■□□□□ 0.68
HDAC3O15379 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.28■□□□□ 0.68
HDAC3O15379 LINC01465-201ENST00000408887 1940 ntBASIC19.28■□□□□ 0.68
HDAC3O15379 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.28■□□□□ 0.68
HDAC3O15379 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
HDAC3O15379 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.28■□□□□ 0.68
HDAC3O15379 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HDAC3O15379 KRT19P1-201ENST00000405746 1186 ntBASIC19.28■□□□□ 0.68
HDAC3O15379 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.28■□□□□ 0.68
HDAC3O15379 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.28■□□□□ 0.68
HDAC3O15379 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 AL591742.1-201ENST00000604433 565 ntBASIC19.28■□□□□ 0.68
HDAC3O15379 AL031963.3-201ENST00000606441 850 ntBASIC19.28■□□□□ 0.68
HDAC3O15379 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HDAC3O15379 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HDAC3O15379 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.28■□□□□ 0.68
HDAC3O15379 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC3O15379 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.27■□□□□ 0.68
HDAC3O15379 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC3O15379 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.27■□□□□ 0.68
HDAC3O15379 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC3O15379 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC3O15379 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC3O15379 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC3O15379 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC3O15379 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC3O15379 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.27■□□□□ 0.68
HDAC3O15379 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.27■□□□□ 0.68
HDAC3O15379 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.27■□□□□ 0.68
HDAC3O15379 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.27■□□□□ 0.68
HDAC3O15379 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.27■□□□□ 0.68
HDAC3O15379 UBE2DNL-204ENST00000602536 740 ntBASIC19.27■□□□□ 0.68
HDAC3O15379 AC005837.3-201ENST00000612163 286 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms