Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.83■□□□□ 0.61
UPK1AO00322 TMEM179-206ENST00000616017 1645 ntBASIC18.83■□□□□ 0.61
UPK1AO00322 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
UPK1AO00322 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK1AO00322 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK1AO00322 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.83■□□□□ 0.6
UPK1AO00322 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.83■□□□□ 0.6
UPK1AO00322 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.83■□□□□ 0.6
UPK1AO00322 AL589743.5-201ENST00000616611 1050 ntBASIC18.83■□□□□ 0.6
UPK1AO00322 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.83■□□□□ 0.6
UPK1AO00322 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
UPK1AO00322 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
UPK1AO00322 TREX1-205ENST00000625293 1783 ntBASIC18.83■□□□□ 0.6
UPK1AO00322 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK1AO00322 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK1AO00322 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK1AO00322 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
UPK1AO00322 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
UPK1AO00322 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
UPK1AO00322 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.82■□□□□ 0.6
UPK1AO00322 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.82■□□□□ 0.6
UPK1AO00322 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.82■□□□□ 0.6
UPK1AO00322 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.82■□□□□ 0.6
UPK1AO00322 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.82■□□□□ 0.6
UPK1AO00322 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.82■□□□□ 0.6
UPK1AO00322 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.82■□□□□ 0.6
UPK1AO00322 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.82■□□□□ 0.6
UPK1AO00322 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1AO00322 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.81■□□□□ 0.6
UPK1AO00322 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.81■□□□□ 0.6
UPK1AO00322 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UPK1AO00322 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1AO00322 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1AO00322 MKRN4P-201ENST00000444706 1521 ntBASIC18.81■□□□□ 0.6
UPK1AO00322 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.81■□□□□ 0.6
UPK1AO00322 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.81■□□□□ 0.6
UPK1AO00322 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1AO00322 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UPK1AO00322 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UPK1AO00322 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.81■□□□□ 0.6
UPK1AO00322 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.81■□□□□ 0.6
UPK1AO00322 AC006970.2-201ENST00000450065 779 ntBASIC18.81■□□□□ 0.6
UPK1AO00322 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.81■□□□□ 0.6
UPK1AO00322 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.81■□□□□ 0.6
UPK1AO00322 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1AO00322 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1AO00322 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1AO00322 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.81■□□□□ 0.6
UPK1AO00322 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1AO00322 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1AO00322 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1AO00322 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1AO00322 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
UPK1AO00322 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.81■□□□□ 0.6
UPK1AO00322 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.8■□□□□ 0.6
UPK1AO00322 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.8■□□□□ 0.6
UPK1AO00322 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
UPK1AO00322 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.8■□□□□ 0.6
UPK1AO00322 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
UPK1AO00322 PTBP1P-201ENST00000554374 1601 ntBASIC18.8■□□□□ 0.6
UPK1AO00322 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1AO00322 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1AO00322 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1AO00322 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1AO00322 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
UPK1AO00322 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1AO00322 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
UPK1AO00322 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
UPK1AO00322 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
UPK1AO00322 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.79■□□□□ 0.6
UPK1AO00322 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.79■□□□□ 0.6
UPK1AO00322 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.79■□□□□ 0.6
UPK1AO00322 AC083906.2-201ENST00000511578 360 ntBASIC18.79■□□□□ 0.6
UPK1AO00322 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.79■□□□□ 0.6
UPK1AO00322 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1AO00322 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms