Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NPIPA2E9PIF3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPIPA2E9PIF3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
NPIPA2E9PIF3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPIPA2E9PIF3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.08■□□□□ 0.49
NPIPA2E9PIF3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 AC133681.1-201ENST00000465482 601 ntBASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 AC023632.3-201ENST00000521633 145 ntBASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NPIPA2E9PIF3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 AC073314.1-201ENST00000568729 2216 ntBASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 AC020907.5-201ENST00000624372 1936 ntBASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NPIPA2E9PIF3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 AP005212.1-201ENST00000581547 1997 ntBASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA2E9PIF3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 AC124283.5-201ENST00000624661 1809 ntBASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 AL157384.1-201ENST00000445995 2473 ntBASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 RPS2P55-201ENST00000397318 883 ntBASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 AC107956.1-201ENST00000494359 873 ntBASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA2E9PIF3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms