Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC004023.1-201ENST00000561473 1744 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 DDX43P1-201ENST00000510713 1763 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC005614.1-201ENST00000598952 3653 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 MIR551B-201ENST00000384984 96 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 MTND6P1-201ENST00000417434 424 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 VN1R37P-201ENST00000419096 748 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 PTPN2P1-201ENST00000423212 1072 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AL022324.2-201ENST00000434827 780 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 PSMD8P1-201ENST00000436275 769 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 WDR82P2-201ENST00000444540 928 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 CEACAMP11-201ENST00000455211 583 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 RN7SL790P-201ENST00000474043 298 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 RPS7P11-201ENST00000484240 586 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC096571.1-202ENST00000506634 735 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 SNX18P23-201ENST00000510867 677 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 HMGN1P26-201ENST00000558737 303 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 RPL7AP69-201ENST00000595306 806 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 RPS4XP21-201ENST00000603814 750 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC009159.2-201ENST00000617603 606 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC005899.6-201ENST00000620729 297 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC010872.1-201ENST00000624225 675 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AL117339.4-201ENST00000608335 7063 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 AC010168.2-201ENST00000562691 5428 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AC010401.2-201ENST00000575137 4934 ntBASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 SPATA31C2-201ENST00000324915 3777 ntBASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 RN7SKP184-201ENST00000362348 333 ntBASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 RNU6-167P-201ENST00000384292 106 ntBASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AC026310.1-201ENST00000396004 378 ntBASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 HMGB1P32-201ENST00000425971 565 ntBASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AC002486.2-201ENST00000447806 590 ntBASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 AC063955.1-201ENST00000462872 685 ntBASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 UOX-201ENST00000471089 899 ntBASIC7.15□□□□□ -1.26
CDK5RAP1Q96SZ6 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms