Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 IGKV3D-25-201ENST00000519599 235 ntBASIC9.98□□□□□ -0.81
VPS8Q8N3P4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 SNORA74.4-201ENST00000607595 199 ntBASIC9.98□□□□□ -0.81
VPS8Q8N3P4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 MIR6721-201ENST00000617181 87 ntBASIC9.98□□□□□ -0.81
VPS8Q8N3P4 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS8Q8N3P4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 RAD17P2-201ENST00000451754 1977 ntBASIC9.97□□□□□ -0.81
VPS8Q8N3P4 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 EEF1B2P3-201ENST00000447718 678 ntBASIC9.97□□□□□ -0.81
VPS8Q8N3P4 AC118758.1-202ENST00000454719 225 ntBASIC9.97□□□□□ -0.81
VPS8Q8N3P4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 LAPTM4BP2-201ENST00000604542 446 ntBASIC9.97□□□□□ -0.81
VPS8Q8N3P4 AL445649.1-201ENST00000615941 691 ntBASIC9.97□□□□□ -0.81
VPS8Q8N3P4 AC073488.6-201ENST00000632293 754 ntBASIC9.97□□□□□ -0.81
VPS8Q8N3P4 CASC19-274ENST00000642018 970 ntBASIC9.97□□□□□ -0.81
VPS8Q8N3P4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS8Q8N3P4 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
VPS8Q8N3P4 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC9.96□□□□□ -0.81
VPS8Q8N3P4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VPS8Q8N3P4 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
VPS8Q8N3P4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC9.96□□□□□ -0.81
VPS8Q8N3P4 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC9.96□□□□□ -0.81
VPS8Q8N3P4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
VPS8Q8N3P4 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
VPS8Q8N3P4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
VPS8Q8N3P4 AC112243.1-201ENST00000623949 3851 ntBASIC9.96□□□□□ -0.82
VPS8Q8N3P4 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VPS8Q8N3P4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VPS8Q8N3P4 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
VPS8Q8N3P4 AC007679.3-201ENST00000434035 414 ntBASIC9.96□□□□□ -0.82
VPS8Q8N3P4 RPL5P7-201ENST00000444235 813 ntBASIC9.96□□□□□ -0.82
VPS8Q8N3P4 AC019084.1-201ENST00000457337 432 ntBASIC9.96□□□□□ -0.82
VPS8Q8N3P4 MTND6P8-201ENST00000503471 522 ntBASIC9.96□□□□□ -0.82
VPS8Q8N3P4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
VPS8Q8N3P4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC9.96□□□□□ -0.82
VPS8Q8N3P4 AP004607.6-201ENST00000525033 1202 ntBASIC9.96□□□□□ -0.82
VPS8Q8N3P4 KCTD9P4-201ENST00000526766 1166 ntBASIC9.96□□□□□ -0.82
VPS8Q8N3P4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC9.96□□□□□ -0.82
VPS8Q8N3P4 AC073593.1-201ENST00000624500 411 ntBASIC9.96□□□□□ -0.82
VPS8Q8N3P4 AC105235.1-201ENST00000623208 1816 ntBASIC9.96□□□□□ -0.82
VPS8Q8N3P4 AL591848.4-201ENST00000567832 3472 ntBASIC9.96□□□□□ -0.82
VPS8Q8N3P4 BIN2P1-201ENST00000504996 1530 ntBASIC9.96□□□□□ -0.82
VPS8Q8N3P4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC9.96□□□□□ -0.82
VPS8Q8N3P4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
VPS8Q8N3P4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 AL451136.1-201ENST00000435399 325 ntBASIC9.95□□□□□ -0.82
VPS8Q8N3P4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 VN1R38P-201ENST00000450265 887 ntBASIC9.95□□□□□ -0.82
VPS8Q8N3P4 AC021006.1-201ENST00000489849 553 ntBASIC9.95□□□□□ -0.82
VPS8Q8N3P4 MIR4271-201ENST00000582451 67 ntBASIC9.95□□□□□ -0.82
VPS8Q8N3P4 AC124916.2-201ENST00000604416 224 ntBASIC9.95□□□□□ -0.82
VPS8Q8N3P4 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS8Q8N3P4 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms